Gene : Lsat_1_v5_gn_2_115321 L. sativa V8
Defline:  (1 of 1) K00995 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (pgsA, PGS1) Genomic Order:  3377
Name:  ? Lsat_1_v5_gn_2_115321 Secondary Identifier:  ? PAC:38961708
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY4FS-7 Lactuca sativa pathologic  
Lsativa PWY-5269 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_115321 0.5kb upstream 0.5kb upstream 2895   true Lsat_1_v8_lg_2: 194064813-194067707 Lactuca sativa
Lsat_1_v5_gn_2_115321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 194067208-194067707 Lactuca sativa
Lsat_1_v5_gn_2_115321 0.5kb downstream 0.5kb downstream 2895   true Lsat_1_v8_lg_2: 194064313-194067207 Lactuca sativa
Lsat_1_v5_gn_2_115321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 194064313-194064812 Lactuca sativa
Lsat_1_v5_gn_2_115321 1.0kb upstream 1.0kb upstream 3395   true Lsat_1_v8_lg_2: 194064813-194068207 Lactuca sativa
Lsat_1_v5_gn_2_115321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 194067208-194068207 Lactuca sativa
Lsat_1_v5_gn_2_115321 1.0kb downstream 1.0kb downstream 3395   true Lsat_1_v8_lg_2: 194063813-194067207 Lactuca sativa
Lsat_1_v5_gn_2_115321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 194063813-194064812 Lactuca sativa
Lsat_1_v5_gn_2_115321 2.0kb upstream 2.0kb upstream 4395   true Lsat_1_v8_lg_2: 194064813-194069207 Lactuca sativa
Lsat_1_v5_gn_2_115321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 194067208-194069207 Lactuca sativa
Lsat_1_v5_gn_2_115321 2.0kb downstream 2.0kb downstream 4395   true Lsat_1_v8_lg_2: 194062813-194067207 Lactuca sativa
Lsat_1_v5_gn_2_115321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 194062813-194064812 Lactuca sativa
Lsat_1_v5_gn_2_115321 5.0kb upstream 5.0kb upstream 7395   true Lsat_1_v8_lg_2: 194064813-194072207 Lactuca sativa
Lsat_1_v5_gn_2_115321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 194067208-194072207 Lactuca sativa
Lsat_1_v5_gn_2_115321 5.0kb downstream 5.0kb downstream 7395   true Lsat_1_v8_lg_2: 194059813-194067207 Lactuca sativa
Lsat_1_v5_gn_2_115321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 194059813-194064812 Lactuca sativa
Lsat_1_v5_gn_2_115321 10.0kb upstream 10.0kb upstream 12395   true Lsat_1_v8_lg_2: 194064813-194077207 Lactuca sativa
Lsat_1_v5_gn_2_115321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 194067208-194077207 Lactuca sativa
Lsat_1_v5_gn_2_115321 10.0kb downstream 10.0kb downstream 12395   true Lsat_1_v8_lg_2: 194054813-194067207 Lactuca sativa
Lsat_1_v5_gn_2_115321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 194054813-194064812 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041214 5273 Angiosperm View MSA
121473121 5263 Asterids View MSA
123750355 5271 Pentapetalae View MSA
122791473 5272 Eudicot View MSA
121349383 5274 Embryophyte View MSA
123424626 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain