Gene : Lsat_1_v5_gn_2_11660 L. sativa V8
Defline:  (1 of 1) PTHR23354//PTHR23354:SF67 - NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED // TLD-DOMAIN CONTAINING NUCLEOLAR PROTEIN Genomic Order:  326
Name:  ? Lsat_1_v5_gn_2_11660 Secondary Identifier:  ? PAC:38959362
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_11660 0.5kb upstream 0.5kb upstream 5305   true Lsat_1_v8_lg_2: 24412785-24418089 Lactuca sativa
Lsat_1_v5_gn_2_11660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 24412785-24413284 Lactuca sativa
Lsat_1_v5_gn_2_11660 0.5kb downstream 0.5kb downstream 5305   true Lsat_1_v8_lg_2: 24413285-24418589 Lactuca sativa
Lsat_1_v5_gn_2_11660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 24418090-24418589 Lactuca sativa
Lsat_1_v5_gn_2_11660 1.0kb upstream 1.0kb upstream 5805   true Lsat_1_v8_lg_2: 24412285-24418089 Lactuca sativa
Lsat_1_v5_gn_2_11660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 24412285-24413284 Lactuca sativa
Lsat_1_v5_gn_2_11660 1.0kb downstream 1.0kb downstream 5805   true Lsat_1_v8_lg_2: 24413285-24419089 Lactuca sativa
Lsat_1_v5_gn_2_11660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 24418090-24419089 Lactuca sativa
Lsat_1_v5_gn_2_11660 2.0kb upstream 2.0kb upstream 6805   true Lsat_1_v8_lg_2: 24411285-24418089 Lactuca sativa
Lsat_1_v5_gn_2_11660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 24411285-24413284 Lactuca sativa
Lsat_1_v5_gn_2_11660 2.0kb downstream 2.0kb downstream 6805   true Lsat_1_v8_lg_2: 24413285-24420089 Lactuca sativa
Lsat_1_v5_gn_2_11660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 24418090-24420089 Lactuca sativa
Lsat_1_v5_gn_2_11660 5.0kb upstream 5.0kb upstream 9805   true Lsat_1_v8_lg_2: 24408285-24418089 Lactuca sativa
Lsat_1_v5_gn_2_11660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 24408285-24413284 Lactuca sativa
Lsat_1_v5_gn_2_11660 5.0kb downstream 5.0kb downstream 9805   true Lsat_1_v8_lg_2: 24413285-24423089 Lactuca sativa
Lsat_1_v5_gn_2_11660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 24418090-24423089 Lactuca sativa
Lsat_1_v5_gn_2_11660 10.0kb upstream 10.0kb upstream 14805   true Lsat_1_v8_lg_2: 24403285-24418089 Lactuca sativa
Lsat_1_v5_gn_2_11660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 24403285-24413284 Lactuca sativa
Lsat_1_v5_gn_2_11660 10.0kb downstream 10.0kb downstream 14805   true Lsat_1_v8_lg_2: 24413285-24428089 Lactuca sativa
Lsat_1_v5_gn_2_11660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 24418090-24428089 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472842 5263 Asterids View MSA
123739747 5271 Pentapetalae View MSA
122789164 5272 Eudicot View MSA
122042380 5273 Angiosperm View MSA
121345600 5274 Embryophyte View MSA
123380242 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain