Gene : Lsat_1_v5_gn_2_117720 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  3425
Name:  ? Lsat_1_v5_gn_2_117720 Secondary Identifier:  ? PAC:38961709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_117720 0.5kb upstream 0.5kb upstream 2846   true Lsat_1_v8_lg_2: 195604790-195607635 Lactuca sativa
Lsat_1_v5_gn_2_117720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 195604790-195605289 Lactuca sativa
Lsat_1_v5_gn_2_117720 0.5kb downstream 0.5kb downstream 2846   true Lsat_1_v8_lg_2: 195605290-195608135 Lactuca sativa
Lsat_1_v5_gn_2_117720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 195607636-195608135 Lactuca sativa
Lsat_1_v5_gn_2_117720 1.0kb upstream 1.0kb upstream 3346   true Lsat_1_v8_lg_2: 195604290-195607635 Lactuca sativa
Lsat_1_v5_gn_2_117720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 195604290-195605289 Lactuca sativa
Lsat_1_v5_gn_2_117720 1.0kb downstream 1.0kb downstream 3346   true Lsat_1_v8_lg_2: 195605290-195608635 Lactuca sativa
Lsat_1_v5_gn_2_117720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 195607636-195608635 Lactuca sativa
Lsat_1_v5_gn_2_117720 2.0kb upstream 2.0kb upstream 4346   true Lsat_1_v8_lg_2: 195603290-195607635 Lactuca sativa
Lsat_1_v5_gn_2_117720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 195603290-195605289 Lactuca sativa
Lsat_1_v5_gn_2_117720 2.0kb downstream 2.0kb downstream 4346   true Lsat_1_v8_lg_2: 195605290-195609635 Lactuca sativa
Lsat_1_v5_gn_2_117720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 195607636-195609635 Lactuca sativa
Lsat_1_v5_gn_2_117720 5.0kb upstream 5.0kb upstream 7346   true Lsat_1_v8_lg_2: 195600290-195607635 Lactuca sativa
Lsat_1_v5_gn_2_117720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 195600290-195605289 Lactuca sativa
Lsat_1_v5_gn_2_117720 5.0kb downstream 5.0kb downstream 7346   true Lsat_1_v8_lg_2: 195605290-195612635 Lactuca sativa
Lsat_1_v5_gn_2_117720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 195607636-195612635 Lactuca sativa
Lsat_1_v5_gn_2_117720 10.0kb upstream 10.0kb upstream 12346   true Lsat_1_v8_lg_2: 195595290-195607635 Lactuca sativa
Lsat_1_v5_gn_2_117720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 195595290-195605289 Lactuca sativa
Lsat_1_v5_gn_2_117720 10.0kb downstream 10.0kb downstream 12346   true Lsat_1_v8_lg_2: 195605290-195617635 Lactuca sativa
Lsat_1_v5_gn_2_117720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 195607636-195617635 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477812 5263 Asterids View MSA
123741335 5271 Pentapetalae View MSA
122792200 5272 Eudicot View MSA
122050004 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain