Gene : Lsat_1_v5_gn_2_11821 L. sativa V8
Defline:  (1 of 4) K12897 - transformer-2 protein (TRA2) Genomic Order:  394
Name:  ? Lsat_1_v5_gn_2_11821 Secondary Identifier:  ? PAC:38957168
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_11821 0.5kb upstream 0.5kb upstream 1754   true Lsat_1_v8_lg_2: 30446660-30448413 Lactuca sativa
Lsat_1_v5_gn_2_11821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 30446660-30447159 Lactuca sativa
Lsat_1_v5_gn_2_11821 0.5kb downstream 0.5kb downstream 1754   true Lsat_1_v8_lg_2: 30447160-30448913 Lactuca sativa
Lsat_1_v5_gn_2_11821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 30448414-30448913 Lactuca sativa
Lsat_1_v5_gn_2_11821 1.0kb upstream 1.0kb upstream 2254   true Lsat_1_v8_lg_2: 30446160-30448413 Lactuca sativa
Lsat_1_v5_gn_2_11821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 30446160-30447159 Lactuca sativa
Lsat_1_v5_gn_2_11821 1.0kb downstream 1.0kb downstream 2254   true Lsat_1_v8_lg_2: 30447160-30449413 Lactuca sativa
Lsat_1_v5_gn_2_11821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 30448414-30449413 Lactuca sativa
Lsat_1_v5_gn_2_11821 2.0kb upstream 2.0kb upstream 3254   true Lsat_1_v8_lg_2: 30445160-30448413 Lactuca sativa
Lsat_1_v5_gn_2_11821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 30445160-30447159 Lactuca sativa
Lsat_1_v5_gn_2_11821 2.0kb downstream 2.0kb downstream 3254   true Lsat_1_v8_lg_2: 30447160-30450413 Lactuca sativa
Lsat_1_v5_gn_2_11821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 30448414-30450413 Lactuca sativa
Lsat_1_v5_gn_2_11821 5.0kb upstream 5.0kb upstream 6254   true Lsat_1_v8_lg_2: 30442160-30448413 Lactuca sativa
Lsat_1_v5_gn_2_11821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 30442160-30447159 Lactuca sativa
Lsat_1_v5_gn_2_11821 5.0kb downstream 5.0kb downstream 6254   true Lsat_1_v8_lg_2: 30447160-30453413 Lactuca sativa
Lsat_1_v5_gn_2_11821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 30448414-30453413 Lactuca sativa
Lsat_1_v5_gn_2_11821 10.0kb upstream 10.0kb upstream 11254   true Lsat_1_v8_lg_2: 30437160-30448413 Lactuca sativa
Lsat_1_v5_gn_2_11821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 30437160-30447159 Lactuca sativa
Lsat_1_v5_gn_2_11821 10.0kb downstream 10.0kb downstream 11254   true Lsat_1_v8_lg_2: 30447160-30458413 Lactuca sativa
Lsat_1_v5_gn_2_11821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 30448414-30458413 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478564 5263 Asterids View MSA
123753292 5271 Pentapetalae View MSA
122796166 5272 Eudicot View MSA
122047965 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310823 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain