Gene : Lsat_1_v5_gn_2_12261 L. sativa V8
Defline:  (1 of 1) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  381
Name:  ? Lsat_1_v5_gn_2_12261 Secondary Identifier:  ? PAC:38962946
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_12261 0.5kb upstream 0.5kb upstream 4971   true Lsat_1_v8_lg_2: 29730690-29735660 Lactuca sativa
Lsat_1_v5_gn_2_12261 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 29730690-29731189 Lactuca sativa
Lsat_1_v5_gn_2_12261 0.5kb downstream 0.5kb downstream 4971   true Lsat_1_v8_lg_2: 29731190-29736160 Lactuca sativa
Lsat_1_v5_gn_2_12261 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 29735661-29736160 Lactuca sativa
Lsat_1_v5_gn_2_12261 1.0kb upstream 1.0kb upstream 5471   true Lsat_1_v8_lg_2: 29730190-29735660 Lactuca sativa
Lsat_1_v5_gn_2_12261 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 29730190-29731189 Lactuca sativa
Lsat_1_v5_gn_2_12261 1.0kb downstream 1.0kb downstream 5471   true Lsat_1_v8_lg_2: 29731190-29736660 Lactuca sativa
Lsat_1_v5_gn_2_12261 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 29735661-29736660 Lactuca sativa
Lsat_1_v5_gn_2_12261 2.0kb upstream 2.0kb upstream 6471   true Lsat_1_v8_lg_2: 29729190-29735660 Lactuca sativa
Lsat_1_v5_gn_2_12261 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 29729190-29731189 Lactuca sativa
Lsat_1_v5_gn_2_12261 2.0kb downstream 2.0kb downstream 6471   true Lsat_1_v8_lg_2: 29731190-29737660 Lactuca sativa
Lsat_1_v5_gn_2_12261 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 29735661-29737660 Lactuca sativa
Lsat_1_v5_gn_2_12261 5.0kb upstream 5.0kb upstream 9471   true Lsat_1_v8_lg_2: 29726190-29735660 Lactuca sativa
Lsat_1_v5_gn_2_12261 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 29726190-29731189 Lactuca sativa
Lsat_1_v5_gn_2_12261 5.0kb downstream 5.0kb downstream 9471   true Lsat_1_v8_lg_2: 29731190-29740660 Lactuca sativa
Lsat_1_v5_gn_2_12261 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 29735661-29740660 Lactuca sativa
Lsat_1_v5_gn_2_12261 10.0kb upstream 10.0kb upstream 14471   true Lsat_1_v8_lg_2: 29721190-29735660 Lactuca sativa
Lsat_1_v5_gn_2_12261 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 29721190-29731189 Lactuca sativa
Lsat_1_v5_gn_2_12261 10.0kb downstream 10.0kb downstream 14471   true Lsat_1_v8_lg_2: 29731190-29745660 Lactuca sativa
Lsat_1_v5_gn_2_12261 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 29735661-29745660 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469393 5263 Asterids View MSA
123743802 5271 Pentapetalae View MSA
122790530 5272 Eudicot View MSA
122047712 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310781 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain