Gene : Lsat_1_v5_gn_2_122560 L. sativa V8
Defline:  (1 of 1) K01079 - phosphoserine phosphatase (serB, PSPH) Genomic Order:  3620
Name:  ? Lsat_1_v5_gn_2_122560 Secondary Identifier:  ? PAC:38960838
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa SER-GLYSYN-PWY Lactuca sativa pathologic  
Lsativa SERSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_122560 0.5kb upstream 0.5kb upstream 2085   true Lsat_1_v8_lg_2: 201526543-201528627 Lactuca sativa
Lsat_1_v5_gn_2_122560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 201526543-201527042 Lactuca sativa
Lsat_1_v5_gn_2_122560 0.5kb downstream 0.5kb downstream 2085   true Lsat_1_v8_lg_2: 201527043-201529127 Lactuca sativa
Lsat_1_v5_gn_2_122560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 201528628-201529127 Lactuca sativa
Lsat_1_v5_gn_2_122560 1.0kb upstream 1.0kb upstream 2585   true Lsat_1_v8_lg_2: 201526043-201528627 Lactuca sativa
Lsat_1_v5_gn_2_122560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 201526043-201527042 Lactuca sativa
Lsat_1_v5_gn_2_122560 1.0kb downstream 1.0kb downstream 2585   true Lsat_1_v8_lg_2: 201527043-201529627 Lactuca sativa
Lsat_1_v5_gn_2_122560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 201528628-201529627 Lactuca sativa
Lsat_1_v5_gn_2_122560 2.0kb upstream 2.0kb upstream 3585   true Lsat_1_v8_lg_2: 201525043-201528627 Lactuca sativa
Lsat_1_v5_gn_2_122560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 201525043-201527042 Lactuca sativa
Lsat_1_v5_gn_2_122560 2.0kb downstream 2.0kb downstream 3585   true Lsat_1_v8_lg_2: 201527043-201530627 Lactuca sativa
Lsat_1_v5_gn_2_122560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 201528628-201530627 Lactuca sativa
Lsat_1_v5_gn_2_122560 5.0kb upstream 5.0kb upstream 6585   true Lsat_1_v8_lg_2: 201522043-201528627 Lactuca sativa
Lsat_1_v5_gn_2_122560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 201522043-201527042 Lactuca sativa
Lsat_1_v5_gn_2_122560 5.0kb downstream 5.0kb downstream 6585   true Lsat_1_v8_lg_2: 201527043-201533627 Lactuca sativa
Lsat_1_v5_gn_2_122560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 201528628-201533627 Lactuca sativa
Lsat_1_v5_gn_2_122560 10.0kb upstream 10.0kb upstream 11585   true Lsat_1_v8_lg_2: 201517043-201528627 Lactuca sativa
Lsat_1_v5_gn_2_122560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 201517043-201527042 Lactuca sativa
Lsat_1_v5_gn_2_122560 10.0kb downstream 10.0kb downstream 11585   true Lsat_1_v8_lg_2: 201527043-201538627 Lactuca sativa
Lsat_1_v5_gn_2_122560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 201528628-201538627 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470004 5263 Asterids View MSA
123738315 5271 Pentapetalae View MSA
122789675 5272 Eudicot View MSA
122041828 5273 Angiosperm View MSA
121346713 5274 Embryophyte View MSA
123426809 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain