Gene : Lsat_1_v5_gn_2_121400 L. sativa V8
Defline:  (1 of 1) PF07014//PF07231 - Hs1pro-1 protein C-terminus (Hs1pro-1_C) // Hs1pro-1 N-terminus (Hs1pro-1_N) Genomic Order:  3603
Name:  ? Lsat_1_v5_gn_2_121400 Secondary Identifier:  ? PAC:38958338
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_121400 0.5kb upstream 0.5kb upstream 2205   true Lsat_1_v8_lg_2: 200643243-200645447 Lactuca sativa
Lsat_1_v5_gn_2_121400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 200643243-200643742 Lactuca sativa
Lsat_1_v5_gn_2_121400 0.5kb downstream 0.5kb downstream 2205   true Lsat_1_v8_lg_2: 200643743-200645947 Lactuca sativa
Lsat_1_v5_gn_2_121400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 200645448-200645947 Lactuca sativa
Lsat_1_v5_gn_2_121400 1.0kb upstream 1.0kb upstream 2705   true Lsat_1_v8_lg_2: 200642743-200645447 Lactuca sativa
Lsat_1_v5_gn_2_121400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 200642743-200643742 Lactuca sativa
Lsat_1_v5_gn_2_121400 1.0kb downstream 1.0kb downstream 2705   true Lsat_1_v8_lg_2: 200643743-200646447 Lactuca sativa
Lsat_1_v5_gn_2_121400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 200645448-200646447 Lactuca sativa
Lsat_1_v5_gn_2_121400 2.0kb upstream 2.0kb upstream 3705   true Lsat_1_v8_lg_2: 200641743-200645447 Lactuca sativa
Lsat_1_v5_gn_2_121400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 200641743-200643742 Lactuca sativa
Lsat_1_v5_gn_2_121400 2.0kb downstream 2.0kb downstream 3705   true Lsat_1_v8_lg_2: 200643743-200647447 Lactuca sativa
Lsat_1_v5_gn_2_121400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 200645448-200647447 Lactuca sativa
Lsat_1_v5_gn_2_121400 5.0kb upstream 5.0kb upstream 6705   true Lsat_1_v8_lg_2: 200638743-200645447 Lactuca sativa
Lsat_1_v5_gn_2_121400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 200638743-200643742 Lactuca sativa
Lsat_1_v5_gn_2_121400 5.0kb downstream 5.0kb downstream 6705   true Lsat_1_v8_lg_2: 200643743-200650447 Lactuca sativa
Lsat_1_v5_gn_2_121400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 200645448-200650447 Lactuca sativa
Lsat_1_v5_gn_2_121400 10.0kb upstream 10.0kb upstream 11705   true Lsat_1_v8_lg_2: 200633743-200645447 Lactuca sativa
Lsat_1_v5_gn_2_121400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 200633743-200643742 Lactuca sativa
Lsat_1_v5_gn_2_121400 10.0kb downstream 10.0kb downstream 11705   true Lsat_1_v8_lg_2: 200643743-200655447 Lactuca sativa
Lsat_1_v5_gn_2_121400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 200645448-200655447 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468655 5263 Asterids View MSA
123747109 5271 Pentapetalae View MSA
122789570 5272 Eudicot View MSA
122043569 5273 Angiosperm View MSA
121344481 5274 Embryophyte View MSA
123380055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain