Gene : Lsat_1_v5_gn_2_45860 L. sativa V8
Defline:  (1 of 3) PTHR24078//PTHR24078:SF222 - DNAJ HOMOLOG SUBFAMILY C MEMBER // SUBFAMILY NOT NAMED Genomic Order:  1204
Name:  ? Lsat_1_v5_gn_2_45860 Secondary Identifier:  ? PAC:38959932
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_45860 0.5kb upstream 0.5kb upstream 2665   true Lsat_1_v8_lg_2: 104535847-104538511 Lactuca sativa
Lsat_1_v5_gn_2_45860 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 104535847-104536346 Lactuca sativa
Lsat_1_v5_gn_2_45860 0.5kb downstream 0.5kb downstream 2665   true Lsat_1_v8_lg_2: 104536347-104539011 Lactuca sativa
Lsat_1_v5_gn_2_45860 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 104538512-104539011 Lactuca sativa
Lsat_1_v5_gn_2_45860 1.0kb upstream 1.0kb upstream 3165   true Lsat_1_v8_lg_2: 104535347-104538511 Lactuca sativa
Lsat_1_v5_gn_2_45860 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 104535347-104536346 Lactuca sativa
Lsat_1_v5_gn_2_45860 1.0kb downstream 1.0kb downstream 3165   true Lsat_1_v8_lg_2: 104536347-104539511 Lactuca sativa
Lsat_1_v5_gn_2_45860 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 104538512-104539511 Lactuca sativa
Lsat_1_v5_gn_2_45860 2.0kb upstream 2.0kb upstream 4165   true Lsat_1_v8_lg_2: 104534347-104538511 Lactuca sativa
Lsat_1_v5_gn_2_45860 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 104534347-104536346 Lactuca sativa
Lsat_1_v5_gn_2_45860 2.0kb downstream 2.0kb downstream 4165   true Lsat_1_v8_lg_2: 104536347-104540511 Lactuca sativa
Lsat_1_v5_gn_2_45860 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 104538512-104540511 Lactuca sativa
Lsat_1_v5_gn_2_45860 5.0kb upstream 5.0kb upstream 7165   true Lsat_1_v8_lg_2: 104531347-104538511 Lactuca sativa
Lsat_1_v5_gn_2_45860 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 104531347-104536346 Lactuca sativa
Lsat_1_v5_gn_2_45860 5.0kb downstream 5.0kb downstream 7165   true Lsat_1_v8_lg_2: 104536347-104543511 Lactuca sativa
Lsat_1_v5_gn_2_45860 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 104538512-104543511 Lactuca sativa
Lsat_1_v5_gn_2_45860 10.0kb upstream 10.0kb upstream 12165   true Lsat_1_v8_lg_2: 104526347-104538511 Lactuca sativa
Lsat_1_v5_gn_2_45860 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 104526347-104536346 Lactuca sativa
Lsat_1_v5_gn_2_45860 10.0kb downstream 10.0kb downstream 12165   true Lsat_1_v8_lg_2: 104536347-104548511 Lactuca sativa
Lsat_1_v5_gn_2_45860 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 104538512-104548511 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479144 5263 Asterids View MSA
123737433 5271 Pentapetalae View MSA
122787255 5272 Eudicot View MSA
122049357 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121348977 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain