Gene : Lsat_1_v5_gn_2_6021 L. sativa V8
Defline:  (1 of 1) PTHR23076//PTHR23076:SF33 - METALLOPROTEASE M41 FTSH // ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Genomic Order:  160
Name:  ? Lsat_1_v5_gn_2_6021 Secondary Identifier:  ? PAC:38958200
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_6021 0.5kb upstream 0.5kb upstream 4212   true Lsat_1_v8_lg_2: 12519514-12523725 Lactuca sativa
Lsat_1_v5_gn_2_6021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 12519514-12520013 Lactuca sativa
Lsat_1_v5_gn_2_6021 0.5kb downstream 0.5kb downstream 4212   true Lsat_1_v8_lg_2: 12520014-12524225 Lactuca sativa
Lsat_1_v5_gn_2_6021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 12523726-12524225 Lactuca sativa
Lsat_1_v5_gn_2_6021 1.0kb upstream 1.0kb upstream 4712   true Lsat_1_v8_lg_2: 12519014-12523725 Lactuca sativa
Lsat_1_v5_gn_2_6021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 12519014-12520013 Lactuca sativa
Lsat_1_v5_gn_2_6021 1.0kb downstream 1.0kb downstream 4712   true Lsat_1_v8_lg_2: 12520014-12524725 Lactuca sativa
Lsat_1_v5_gn_2_6021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 12523726-12524725 Lactuca sativa
Lsat_1_v5_gn_2_6021 2.0kb upstream 2.0kb upstream 5712   true Lsat_1_v8_lg_2: 12518014-12523725 Lactuca sativa
Lsat_1_v5_gn_2_6021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 12518014-12520013 Lactuca sativa
Lsat_1_v5_gn_2_6021 2.0kb downstream 2.0kb downstream 5712   true Lsat_1_v8_lg_2: 12520014-12525725 Lactuca sativa
Lsat_1_v5_gn_2_6021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 12523726-12525725 Lactuca sativa
Lsat_1_v5_gn_2_6021 5.0kb upstream 5.0kb upstream 8712   true Lsat_1_v8_lg_2: 12515014-12523725 Lactuca sativa
Lsat_1_v5_gn_2_6021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 12515014-12520013 Lactuca sativa
Lsat_1_v5_gn_2_6021 5.0kb downstream 5.0kb downstream 8712   true Lsat_1_v8_lg_2: 12520014-12528725 Lactuca sativa
Lsat_1_v5_gn_2_6021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 12523726-12528725 Lactuca sativa
Lsat_1_v5_gn_2_6021 10.0kb upstream 10.0kb upstream 13712   true Lsat_1_v8_lg_2: 12510014-12523725 Lactuca sativa
Lsat_1_v5_gn_2_6021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 12510014-12520013 Lactuca sativa
Lsat_1_v5_gn_2_6021 10.0kb downstream 10.0kb downstream 13712   true Lsat_1_v8_lg_2: 12520014-12533725 Lactuca sativa
Lsat_1_v5_gn_2_6021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 12523726-12533725 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480739 5263 Asterids View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain