Gene : Lsat_1_v5_gn_2_62680 L. sativa V8
Defline:  (1 of 8) KOG3246 - Sentrin-specific cysteine protease (Ulp1 family) Genomic Order:  1615
Name:  ? Lsat_1_v5_gn_2_62680 Secondary Identifier:  ? PAC:38962709
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_62680 0.5kb upstream 0.5kb upstream 3560   true Lsat_1_v8_lg_2: 133123850-133127409 Lactuca sativa
Lsat_1_v5_gn_2_62680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 133126910-133127409 Lactuca sativa
Lsat_1_v5_gn_2_62680 0.5kb downstream 0.5kb downstream 3560   true Lsat_1_v8_lg_2: 133123350-133126909 Lactuca sativa
Lsat_1_v5_gn_2_62680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 133123350-133123849 Lactuca sativa
Lsat_1_v5_gn_2_62680 1.0kb upstream 1.0kb upstream 4060   true Lsat_1_v8_lg_2: 133123850-133127909 Lactuca sativa
Lsat_1_v5_gn_2_62680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 133126910-133127909 Lactuca sativa
Lsat_1_v5_gn_2_62680 1.0kb downstream 1.0kb downstream 4060   true Lsat_1_v8_lg_2: 133122850-133126909 Lactuca sativa
Lsat_1_v5_gn_2_62680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 133122850-133123849 Lactuca sativa
Lsat_1_v5_gn_2_62680 2.0kb upstream 2.0kb upstream 5060   true Lsat_1_v8_lg_2: 133123850-133128909 Lactuca sativa
Lsat_1_v5_gn_2_62680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 133126910-133128909 Lactuca sativa
Lsat_1_v5_gn_2_62680 2.0kb downstream 2.0kb downstream 5060   true Lsat_1_v8_lg_2: 133121850-133126909 Lactuca sativa
Lsat_1_v5_gn_2_62680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 133121850-133123849 Lactuca sativa
Lsat_1_v5_gn_2_62680 5.0kb upstream 5.0kb upstream 8060   true Lsat_1_v8_lg_2: 133123850-133131909 Lactuca sativa
Lsat_1_v5_gn_2_62680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 133126910-133131909 Lactuca sativa
Lsat_1_v5_gn_2_62680 5.0kb downstream 5.0kb downstream 8060   true Lsat_1_v8_lg_2: 133118850-133126909 Lactuca sativa
Lsat_1_v5_gn_2_62680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 133118850-133123849 Lactuca sativa
Lsat_1_v5_gn_2_62680 10.0kb upstream 10.0kb upstream 13060   true Lsat_1_v8_lg_2: 133123850-133136909 Lactuca sativa
Lsat_1_v5_gn_2_62680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 133126910-133136909 Lactuca sativa
Lsat_1_v5_gn_2_62680 10.0kb downstream 10.0kb downstream 13060   true Lsat_1_v8_lg_2: 133113850-133126909 Lactuca sativa
Lsat_1_v5_gn_2_62680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 133113850-133123849 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121450186 5263 Asterids View MSA
123753730 5271 Pentapetalae View MSA
122794426 5272 Eudicot View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain