Gene : Lsat_1_v5_gn_2_660 L. sativa V8
Defline:  (1 of 2) K08852 - serine/threonine-protein kinase/endoribonuclease IRE1 (ERN1) Genomic Order:  54
Name:  ? Lsat_1_v5_gn_2_660 Secondary Identifier:  ? PAC:38959985
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_660 0.5kb upstream 0.5kb upstream 6573   true Lsat_1_v8_lg_2: 3220339-3226911 Lactuca sativa
Lsat_1_v5_gn_2_660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 3226412-3226911 Lactuca sativa
Lsat_1_v5_gn_2_660 0.5kb downstream 0.5kb downstream 6573   true Lsat_1_v8_lg_2: 3219839-3226411 Lactuca sativa
Lsat_1_v5_gn_2_660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 3219839-3220338 Lactuca sativa
Lsat_1_v5_gn_2_660 1.0kb upstream 1.0kb upstream 7073   true Lsat_1_v8_lg_2: 3220339-3227411 Lactuca sativa
Lsat_1_v5_gn_2_660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 3226412-3227411 Lactuca sativa
Lsat_1_v5_gn_2_660 1.0kb downstream 1.0kb downstream 7073   true Lsat_1_v8_lg_2: 3219339-3226411 Lactuca sativa
Lsat_1_v5_gn_2_660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 3219339-3220338 Lactuca sativa
Lsat_1_v5_gn_2_660 2.0kb upstream 2.0kb upstream 8073   true Lsat_1_v8_lg_2: 3220339-3228411 Lactuca sativa
Lsat_1_v5_gn_2_660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 3226412-3228411 Lactuca sativa
Lsat_1_v5_gn_2_660 2.0kb downstream 2.0kb downstream 8073   true Lsat_1_v8_lg_2: 3218339-3226411 Lactuca sativa
Lsat_1_v5_gn_2_660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 3218339-3220338 Lactuca sativa
Lsat_1_v5_gn_2_660 5.0kb upstream 5.0kb upstream 11073   true Lsat_1_v8_lg_2: 3220339-3231411 Lactuca sativa
Lsat_1_v5_gn_2_660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 3226412-3231411 Lactuca sativa
Lsat_1_v5_gn_2_660 5.0kb downstream 5.0kb downstream 11073   true Lsat_1_v8_lg_2: 3215339-3226411 Lactuca sativa
Lsat_1_v5_gn_2_660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 3215339-3220338 Lactuca sativa
Lsat_1_v5_gn_2_660 10.0kb upstream 10.0kb upstream 16073   true Lsat_1_v8_lg_2: 3220339-3236411 Lactuca sativa
Lsat_1_v5_gn_2_660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 3226412-3236411 Lactuca sativa
Lsat_1_v5_gn_2_660 10.0kb downstream 10.0kb downstream 16073   true Lsat_1_v8_lg_2: 3210339-3226411 Lactuca sativa
Lsat_1_v5_gn_2_660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 3210339-3220338 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466719 5263 Asterids View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain