Gene : Lsat_1_v5_gn_2_65180 L. sativa V8
Defline:  (1 of 8) PF07466 - Protein of unknown function (DUF1517) (DUF1517) Genomic Order:  1687
Name:  ? Lsat_1_v5_gn_2_65180 Secondary Identifier:  ? PAC:38957497
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_65180 0.5kb upstream 0.5kb upstream 3190   true Lsat_1_v8_lg_2: 136037367-136040556 Lactuca sativa
Lsat_1_v5_gn_2_65180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 136037367-136037866 Lactuca sativa
Lsat_1_v5_gn_2_65180 0.5kb downstream 0.5kb downstream 3190   true Lsat_1_v8_lg_2: 136037867-136041056 Lactuca sativa
Lsat_1_v5_gn_2_65180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 136040557-136041056 Lactuca sativa
Lsat_1_v5_gn_2_65180 1.0kb upstream 1.0kb upstream 3690   true Lsat_1_v8_lg_2: 136036867-136040556 Lactuca sativa
Lsat_1_v5_gn_2_65180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 136036867-136037866 Lactuca sativa
Lsat_1_v5_gn_2_65180 1.0kb downstream 1.0kb downstream 3690   true Lsat_1_v8_lg_2: 136037867-136041556 Lactuca sativa
Lsat_1_v5_gn_2_65180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 136040557-136041556 Lactuca sativa
Lsat_1_v5_gn_2_65180 2.0kb upstream 2.0kb upstream 4690   true Lsat_1_v8_lg_2: 136035867-136040556 Lactuca sativa
Lsat_1_v5_gn_2_65180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 136035867-136037866 Lactuca sativa
Lsat_1_v5_gn_2_65180 2.0kb downstream 2.0kb downstream 4690   true Lsat_1_v8_lg_2: 136037867-136042556 Lactuca sativa
Lsat_1_v5_gn_2_65180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 136040557-136042556 Lactuca sativa
Lsat_1_v5_gn_2_65180 5.0kb upstream 5.0kb upstream 7690   true Lsat_1_v8_lg_2: 136032867-136040556 Lactuca sativa
Lsat_1_v5_gn_2_65180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 136032867-136037866 Lactuca sativa
Lsat_1_v5_gn_2_65180 5.0kb downstream 5.0kb downstream 7690   true Lsat_1_v8_lg_2: 136037867-136045556 Lactuca sativa
Lsat_1_v5_gn_2_65180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 136040557-136045556 Lactuca sativa
Lsat_1_v5_gn_2_65180 10.0kb upstream 10.0kb upstream 12690   true Lsat_1_v8_lg_2: 136027867-136040556 Lactuca sativa
Lsat_1_v5_gn_2_65180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 136027867-136037866 Lactuca sativa
Lsat_1_v5_gn_2_65180 10.0kb downstream 10.0kb downstream 12690   true Lsat_1_v8_lg_2: 136037867-136050556 Lactuca sativa
Lsat_1_v5_gn_2_65180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 136040557-136050556 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480285 5263 Asterids View MSA
123753168 5271 Pentapetalae View MSA
122797906 5272 Eudicot View MSA
122042227 5273 Angiosperm View MSA
123429152 5275 Viridiplantae View MSA
121348826 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain