Gene : Lsat_1_v5_gn_2_6661 L. sativa V8
Defline:  (1 of 16) PF00924 - Mechanosensitive ion channel (MS_channel) Genomic Order:  183
Name:  ? Lsat_1_v5_gn_2_6661 Secondary Identifier:  ? PAC:38958039
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_6661 0.5kb upstream 0.5kb upstream 3747   true Lsat_1_v8_lg_2: 13663555-13667301 Lactuca sativa
Lsat_1_v5_gn_2_6661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 13666802-13667301 Lactuca sativa
Lsat_1_v5_gn_2_6661 0.5kb downstream 0.5kb downstream 3747   true Lsat_1_v8_lg_2: 13663055-13666801 Lactuca sativa
Lsat_1_v5_gn_2_6661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 13663055-13663554 Lactuca sativa
Lsat_1_v5_gn_2_6661 1.0kb upstream 1.0kb upstream 4247   true Lsat_1_v8_lg_2: 13663555-13667801 Lactuca sativa
Lsat_1_v5_gn_2_6661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 13666802-13667801 Lactuca sativa
Lsat_1_v5_gn_2_6661 1.0kb downstream 1.0kb downstream 4247   true Lsat_1_v8_lg_2: 13662555-13666801 Lactuca sativa
Lsat_1_v5_gn_2_6661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 13662555-13663554 Lactuca sativa
Lsat_1_v5_gn_2_6661 2.0kb upstream 2.0kb upstream 5247   true Lsat_1_v8_lg_2: 13663555-13668801 Lactuca sativa
Lsat_1_v5_gn_2_6661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 13666802-13668801 Lactuca sativa
Lsat_1_v5_gn_2_6661 2.0kb downstream 2.0kb downstream 5247   true Lsat_1_v8_lg_2: 13661555-13666801 Lactuca sativa
Lsat_1_v5_gn_2_6661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 13661555-13663554 Lactuca sativa
Lsat_1_v5_gn_2_6661 5.0kb upstream 5.0kb upstream 8247   true Lsat_1_v8_lg_2: 13663555-13671801 Lactuca sativa
Lsat_1_v5_gn_2_6661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 13666802-13671801 Lactuca sativa
Lsat_1_v5_gn_2_6661 5.0kb downstream 5.0kb downstream 8247   true Lsat_1_v8_lg_2: 13658555-13666801 Lactuca sativa
Lsat_1_v5_gn_2_6661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 13658555-13663554 Lactuca sativa
Lsat_1_v5_gn_2_6661 10.0kb upstream 10.0kb upstream 13247   true Lsat_1_v8_lg_2: 13663555-13676801 Lactuca sativa
Lsat_1_v5_gn_2_6661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 13666802-13676801 Lactuca sativa
Lsat_1_v5_gn_2_6661 10.0kb downstream 10.0kb downstream 13247   true Lsat_1_v8_lg_2: 13653555-13666801 Lactuca sativa
Lsat_1_v5_gn_2_6661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 13653555-13663554 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473479 5263 Asterids View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain