Gene : Lsat_1_v5_gn_2_66580 L. sativa V8
Defline:  (1 of 2) PTHR31662//PTHR31662:SF6 - FAMILY NOT NAMED // DNA-BINDING STOREKEEPER PROTEIN-RELATED TRANSCRIPTIONAL REGULATOR Genomic Order:  1733
Name:  ? Lsat_1_v5_gn_2_66580 Secondary Identifier:  ? PAC:38960747
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_66580 0.5kb upstream 0.5kb upstream 2461   true Lsat_1_v8_lg_2: 137707430-137709890 Lactuca sativa
Lsat_1_v5_gn_2_66580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 137709391-137709890 Lactuca sativa
Lsat_1_v5_gn_2_66580 0.5kb downstream 0.5kb downstream 2461   true Lsat_1_v8_lg_2: 137706930-137709390 Lactuca sativa
Lsat_1_v5_gn_2_66580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 137706930-137707429 Lactuca sativa
Lsat_1_v5_gn_2_66580 1.0kb upstream 1.0kb upstream 2961   true Lsat_1_v8_lg_2: 137707430-137710390 Lactuca sativa
Lsat_1_v5_gn_2_66580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 137709391-137710390 Lactuca sativa
Lsat_1_v5_gn_2_66580 1.0kb downstream 1.0kb downstream 2961   true Lsat_1_v8_lg_2: 137706430-137709390 Lactuca sativa
Lsat_1_v5_gn_2_66580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 137706430-137707429 Lactuca sativa
Lsat_1_v5_gn_2_66580 2.0kb upstream 2.0kb upstream 3961   true Lsat_1_v8_lg_2: 137707430-137711390 Lactuca sativa
Lsat_1_v5_gn_2_66580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 137709391-137711390 Lactuca sativa
Lsat_1_v5_gn_2_66580 2.0kb downstream 2.0kb downstream 3961   true Lsat_1_v8_lg_2: 137705430-137709390 Lactuca sativa
Lsat_1_v5_gn_2_66580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 137705430-137707429 Lactuca sativa
Lsat_1_v5_gn_2_66580 5.0kb upstream 5.0kb upstream 6961   true Lsat_1_v8_lg_2: 137707430-137714390 Lactuca sativa
Lsat_1_v5_gn_2_66580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 137709391-137714390 Lactuca sativa
Lsat_1_v5_gn_2_66580 5.0kb downstream 5.0kb downstream 6961   true Lsat_1_v8_lg_2: 137702430-137709390 Lactuca sativa
Lsat_1_v5_gn_2_66580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 137702430-137707429 Lactuca sativa
Lsat_1_v5_gn_2_66580 10.0kb upstream 10.0kb upstream 11961   true Lsat_1_v8_lg_2: 137707430-137719390 Lactuca sativa
Lsat_1_v5_gn_2_66580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 137709391-137719390 Lactuca sativa
Lsat_1_v5_gn_2_66580 10.0kb downstream 10.0kb downstream 11961   true Lsat_1_v8_lg_2: 137697430-137709390 Lactuca sativa
Lsat_1_v5_gn_2_66580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 137697430-137707429 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473037 5263 Asterids View MSA
123751469 5271 Pentapetalae View MSA
122797914 5272 Eudicot View MSA
122051487 5273 Angiosperm View MSA
121348911 5274 Embryophyte View MSA
123381074 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain