Gene : Lsat_1_v5_gn_2_22561 L. sativa V8
Defline:  (1 of 2) PTHR22952//PTHR22952:SF208 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  640
Name:  ? Lsat_1_v5_gn_2_22561 Secondary Identifier:  ? PAC:38962630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_22561 0.5kb upstream 0.5kb upstream 3059   true Lsat_1_v8_lg_2: 53993406-53996464 Lactuca sativa
Lsat_1_v5_gn_2_22561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 53995965-53996464 Lactuca sativa
Lsat_1_v5_gn_2_22561 0.5kb downstream 0.5kb downstream 3059   true Lsat_1_v8_lg_2: 53992906-53995964 Lactuca sativa
Lsat_1_v5_gn_2_22561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 53992906-53993405 Lactuca sativa
Lsat_1_v5_gn_2_22561 1.0kb upstream 1.0kb upstream 3559   true Lsat_1_v8_lg_2: 53993406-53996964 Lactuca sativa
Lsat_1_v5_gn_2_22561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 53995965-53996964 Lactuca sativa
Lsat_1_v5_gn_2_22561 1.0kb downstream 1.0kb downstream 3559   true Lsat_1_v8_lg_2: 53992406-53995964 Lactuca sativa
Lsat_1_v5_gn_2_22561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 53992406-53993405 Lactuca sativa
Lsat_1_v5_gn_2_22561 2.0kb upstream 2.0kb upstream 4559   true Lsat_1_v8_lg_2: 53993406-53997964 Lactuca sativa
Lsat_1_v5_gn_2_22561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 53995965-53997964 Lactuca sativa
Lsat_1_v5_gn_2_22561 2.0kb downstream 2.0kb downstream 4559   true Lsat_1_v8_lg_2: 53991406-53995964 Lactuca sativa
Lsat_1_v5_gn_2_22561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 53991406-53993405 Lactuca sativa
Lsat_1_v5_gn_2_22561 5.0kb upstream 5.0kb upstream 7559   true Lsat_1_v8_lg_2: 53993406-54000964 Lactuca sativa
Lsat_1_v5_gn_2_22561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 53995965-54000964 Lactuca sativa
Lsat_1_v5_gn_2_22561 5.0kb downstream 5.0kb downstream 7559   true Lsat_1_v8_lg_2: 53988406-53995964 Lactuca sativa
Lsat_1_v5_gn_2_22561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 53988406-53993405 Lactuca sativa
Lsat_1_v5_gn_2_22561 10.0kb upstream 10.0kb upstream 12559   true Lsat_1_v8_lg_2: 53993406-54005964 Lactuca sativa
Lsat_1_v5_gn_2_22561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 53995965-54005964 Lactuca sativa
Lsat_1_v5_gn_2_22561 10.0kb downstream 10.0kb downstream 12559   true Lsat_1_v8_lg_2: 53983406-53995964 Lactuca sativa
Lsat_1_v5_gn_2_22561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 53983406-53993405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481609 5263 Asterids View MSA
123741082 5271 Pentapetalae View MSA
122785822 5272 Eudicot View MSA
122047006 5273 Angiosperm View MSA
121351169 5274 Embryophyte View MSA
123425858 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain