Gene : Lsat_1_v5_gn_2_24101 L. sativa V8
Defline:  (1 of 1) PTHR10516:SF323 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC Genomic Order:  621
Name:  ? Lsat_1_v5_gn_2_24101 Secondary Identifier:  ? PAC:38958535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_24101 0.5kb upstream 0.5kb upstream 4849   true Lsat_1_v8_lg_2: 51809148-51813996 Lactuca sativa
Lsat_1_v5_gn_2_24101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 51809148-51809647 Lactuca sativa
Lsat_1_v5_gn_2_24101 0.5kb downstream 0.5kb downstream 4849   true Lsat_1_v8_lg_2: 51809648-51814496 Lactuca sativa
Lsat_1_v5_gn_2_24101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 51813997-51814496 Lactuca sativa
Lsat_1_v5_gn_2_24101 1.0kb upstream 1.0kb upstream 5349   true Lsat_1_v8_lg_2: 51808648-51813996 Lactuca sativa
Lsat_1_v5_gn_2_24101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 51808648-51809647 Lactuca sativa
Lsat_1_v5_gn_2_24101 1.0kb downstream 1.0kb downstream 5349   true Lsat_1_v8_lg_2: 51809648-51814996 Lactuca sativa
Lsat_1_v5_gn_2_24101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 51813997-51814996 Lactuca sativa
Lsat_1_v5_gn_2_24101 2.0kb upstream 2.0kb upstream 6349   true Lsat_1_v8_lg_2: 51807648-51813996 Lactuca sativa
Lsat_1_v5_gn_2_24101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 51807648-51809647 Lactuca sativa
Lsat_1_v5_gn_2_24101 2.0kb downstream 2.0kb downstream 6349   true Lsat_1_v8_lg_2: 51809648-51815996 Lactuca sativa
Lsat_1_v5_gn_2_24101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 51813997-51815996 Lactuca sativa
Lsat_1_v5_gn_2_24101 5.0kb upstream 5.0kb upstream 9349   true Lsat_1_v8_lg_2: 51804648-51813996 Lactuca sativa
Lsat_1_v5_gn_2_24101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 51804648-51809647 Lactuca sativa
Lsat_1_v5_gn_2_24101 5.0kb downstream 5.0kb downstream 9349   true Lsat_1_v8_lg_2: 51809648-51818996 Lactuca sativa
Lsat_1_v5_gn_2_24101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 51813997-51818996 Lactuca sativa
Lsat_1_v5_gn_2_24101 10.0kb upstream 10.0kb upstream 14349   true Lsat_1_v8_lg_2: 51799648-51813996 Lactuca sativa
Lsat_1_v5_gn_2_24101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 51799648-51809647 Lactuca sativa
Lsat_1_v5_gn_2_24101 10.0kb downstream 10.0kb downstream 14349   true Lsat_1_v8_lg_2: 51809648-51823996 Lactuca sativa
Lsat_1_v5_gn_2_24101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 51813997-51823996 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471627 5263 Asterids View MSA
123739140 5271 Pentapetalae View MSA
122789715 5272 Eudicot View MSA
122047371 5273 Angiosperm View MSA
121347263 5274 Embryophyte View MSA
123426566 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain