Gene : Lsat_1_v5_gn_2_23140 L. sativa V8
Defline:  (1 of 1) PTHR21737:SF4 - CACTIN Genomic Order:  624
Name:  ? Lsat_1_v5_gn_2_23140 Secondary Identifier:  ? PAC:38960496
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_23140 0.5kb upstream 0.5kb upstream 5132   true Lsat_1_v8_lg_2: 52219434-52224565 Lactuca sativa
Lsat_1_v5_gn_2_23140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 52224066-52224565 Lactuca sativa
Lsat_1_v5_gn_2_23140 0.5kb downstream 0.5kb downstream 5132   true Lsat_1_v8_lg_2: 52218934-52224065 Lactuca sativa
Lsat_1_v5_gn_2_23140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 52218934-52219433 Lactuca sativa
Lsat_1_v5_gn_2_23140 1.0kb upstream 1.0kb upstream 5632   true Lsat_1_v8_lg_2: 52219434-52225065 Lactuca sativa
Lsat_1_v5_gn_2_23140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 52224066-52225065 Lactuca sativa
Lsat_1_v5_gn_2_23140 1.0kb downstream 1.0kb downstream 5632   true Lsat_1_v8_lg_2: 52218434-52224065 Lactuca sativa
Lsat_1_v5_gn_2_23140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 52218434-52219433 Lactuca sativa
Lsat_1_v5_gn_2_23140 2.0kb upstream 2.0kb upstream 6632   true Lsat_1_v8_lg_2: 52219434-52226065 Lactuca sativa
Lsat_1_v5_gn_2_23140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 52224066-52226065 Lactuca sativa
Lsat_1_v5_gn_2_23140 2.0kb downstream 2.0kb downstream 6632   true Lsat_1_v8_lg_2: 52217434-52224065 Lactuca sativa
Lsat_1_v5_gn_2_23140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 52217434-52219433 Lactuca sativa
Lsat_1_v5_gn_2_23140 5.0kb upstream 5.0kb upstream 9632   true Lsat_1_v8_lg_2: 52219434-52229065 Lactuca sativa
Lsat_1_v5_gn_2_23140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 52224066-52229065 Lactuca sativa
Lsat_1_v5_gn_2_23140 5.0kb downstream 5.0kb downstream 9632   true Lsat_1_v8_lg_2: 52214434-52224065 Lactuca sativa
Lsat_1_v5_gn_2_23140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 52214434-52219433 Lactuca sativa
Lsat_1_v5_gn_2_23140 10.0kb upstream 10.0kb upstream 14632   true Lsat_1_v8_lg_2: 52219434-52234065 Lactuca sativa
Lsat_1_v5_gn_2_23140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 52224066-52234065 Lactuca sativa
Lsat_1_v5_gn_2_23140 10.0kb downstream 10.0kb downstream 14632   true Lsat_1_v8_lg_2: 52209434-52224065 Lactuca sativa
Lsat_1_v5_gn_2_23140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 52209434-52219433 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469312 5263 Asterids View MSA
123746898 5271 Pentapetalae View MSA
122792655 5272 Eudicot View MSA
122043327 5273 Angiosperm View MSA
121346365 5274 Embryophyte View MSA
123428349 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain