Gene : Lsat_1_v5_gn_2_31680 L. sativa V8
Defline:  (1 of 5) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  847
Name:  ? Lsat_1_v5_gn_2_31680 Secondary Identifier:  ? PAC:38958837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_31680 0.5kb upstream 0.5kb upstream 1079   true Lsat_1_v8_lg_2: 71860633-71861711 Lactuca sativa
Lsat_1_v5_gn_2_31680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 71861212-71861711 Lactuca sativa
Lsat_1_v5_gn_2_31680 0.5kb downstream 0.5kb downstream 1079   true Lsat_1_v8_lg_2: 71860133-71861211 Lactuca sativa
Lsat_1_v5_gn_2_31680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 71860133-71860632 Lactuca sativa
Lsat_1_v5_gn_2_31680 1.0kb upstream 1.0kb upstream 1579   true Lsat_1_v8_lg_2: 71860633-71862211 Lactuca sativa
Lsat_1_v5_gn_2_31680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 71861212-71862211 Lactuca sativa
Lsat_1_v5_gn_2_31680 1.0kb downstream 1.0kb downstream 1579   true Lsat_1_v8_lg_2: 71859633-71861211 Lactuca sativa
Lsat_1_v5_gn_2_31680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 71859633-71860632 Lactuca sativa
Lsat_1_v5_gn_2_31680 2.0kb upstream 2.0kb upstream 2579   true Lsat_1_v8_lg_2: 71860633-71863211 Lactuca sativa
Lsat_1_v5_gn_2_31680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 71861212-71863211 Lactuca sativa
Lsat_1_v5_gn_2_31680 2.0kb downstream 2.0kb downstream 2579   true Lsat_1_v8_lg_2: 71858633-71861211 Lactuca sativa
Lsat_1_v5_gn_2_31680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 71858633-71860632 Lactuca sativa
Lsat_1_v5_gn_2_31680 5.0kb upstream 5.0kb upstream 5579   true Lsat_1_v8_lg_2: 71860633-71866211 Lactuca sativa
Lsat_1_v5_gn_2_31680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 71861212-71866211 Lactuca sativa
Lsat_1_v5_gn_2_31680 5.0kb downstream 5.0kb downstream 5579   true Lsat_1_v8_lg_2: 71855633-71861211 Lactuca sativa
Lsat_1_v5_gn_2_31680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 71855633-71860632 Lactuca sativa
Lsat_1_v5_gn_2_31680 10.0kb upstream 10.0kb upstream 10579   true Lsat_1_v8_lg_2: 71860633-71871211 Lactuca sativa
Lsat_1_v5_gn_2_31680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 71861212-71871211 Lactuca sativa
Lsat_1_v5_gn_2_31680 10.0kb downstream 10.0kb downstream 10579   true Lsat_1_v8_lg_2: 71850633-71861211 Lactuca sativa
Lsat_1_v5_gn_2_31680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 71850633-71860632 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472499 5263 Asterids View MSA
123753343 5271 Pentapetalae View MSA
122794093 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain