Gene : Lsat_1_v5_gn_2_3440 L. sativa V8
Defline:  (1 of 6) PF04578//PF13968 - Protein of unknown function, DUF594 (DUF594) // Domain of unknown function (DUF4220) (DUF4220) Genomic Order:  93
Name:  ? Lsat_1_v5_gn_2_3440 Secondary Identifier:  ? PAC:38957783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_3440 0.5kb upstream 0.5kb upstream 2666   true Lsat_1_v8_lg_2: 7341441-7344106 Lactuca sativa
Lsat_1_v5_gn_2_3440 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 7341441-7341940 Lactuca sativa
Lsat_1_v5_gn_2_3440 0.5kb downstream 0.5kb downstream 2666   true Lsat_1_v8_lg_2: 7341941-7344606 Lactuca sativa
Lsat_1_v5_gn_2_3440 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 7344107-7344606 Lactuca sativa
Lsat_1_v5_gn_2_3440 1.0kb upstream 1.0kb upstream 3166   true Lsat_1_v8_lg_2: 7340941-7344106 Lactuca sativa
Lsat_1_v5_gn_2_3440 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 7340941-7341940 Lactuca sativa
Lsat_1_v5_gn_2_3440 1.0kb downstream 1.0kb downstream 3166   true Lsat_1_v8_lg_2: 7341941-7345106 Lactuca sativa
Lsat_1_v5_gn_2_3440 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 7344107-7345106 Lactuca sativa
Lsat_1_v5_gn_2_3440 2.0kb upstream 2.0kb upstream 4166   true Lsat_1_v8_lg_2: 7339941-7344106 Lactuca sativa
Lsat_1_v5_gn_2_3440 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 7339941-7341940 Lactuca sativa
Lsat_1_v5_gn_2_3440 2.0kb downstream 2.0kb downstream 4166   true Lsat_1_v8_lg_2: 7341941-7346106 Lactuca sativa
Lsat_1_v5_gn_2_3440 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 7344107-7346106 Lactuca sativa
Lsat_1_v5_gn_2_3440 5.0kb upstream 5.0kb upstream 7166   true Lsat_1_v8_lg_2: 7336941-7344106 Lactuca sativa
Lsat_1_v5_gn_2_3440 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 7336941-7341940 Lactuca sativa
Lsat_1_v5_gn_2_3440 5.0kb downstream 5.0kb downstream 7166   true Lsat_1_v8_lg_2: 7341941-7349106 Lactuca sativa
Lsat_1_v5_gn_2_3440 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 7344107-7349106 Lactuca sativa
Lsat_1_v5_gn_2_3440 10.0kb upstream 10.0kb upstream 12166   true Lsat_1_v8_lg_2: 7331941-7344106 Lactuca sativa
Lsat_1_v5_gn_2_3440 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 7331941-7341940 Lactuca sativa
Lsat_1_v5_gn_2_3440 10.0kb downstream 10.0kb downstream 12166   true Lsat_1_v8_lg_2: 7341941-7354106 Lactuca sativa
Lsat_1_v5_gn_2_3440 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 7344107-7354106 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029142 5273 Angiosperm View MSA
121481406 5263 Asterids View MSA
123752826 5271 Pentapetalae View MSA
122795885 5272 Eudicot View MSA
121350539 5274 Embryophyte View MSA
123381781 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain