Gene : Lsat_1_v5_gn_2_37361 L. sativa V8
Defline:  (1 of 1) PTHR23240//PTHR23240:SF11 - DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED // SUBFAMILY NOT NAMED Genomic Order:  996
Name:  ? Lsat_1_v5_gn_2_37361 Secondary Identifier:  ? PAC:38959912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_37361 0.5kb upstream 0.5kb upstream 3142   true Lsat_1_v8_lg_2: 89197626-89200767 Lactuca sativa
Lsat_1_v5_gn_2_37361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 89200268-89200767 Lactuca sativa
Lsat_1_v5_gn_2_37361 0.5kb downstream 0.5kb downstream 3142   true Lsat_1_v8_lg_2: 89197126-89200267 Lactuca sativa
Lsat_1_v5_gn_2_37361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 89197126-89197625 Lactuca sativa
Lsat_1_v5_gn_2_37361 1.0kb upstream 1.0kb upstream 3642   true Lsat_1_v8_lg_2: 89197626-89201267 Lactuca sativa
Lsat_1_v5_gn_2_37361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 89200268-89201267 Lactuca sativa
Lsat_1_v5_gn_2_37361 1.0kb downstream 1.0kb downstream 3642   true Lsat_1_v8_lg_2: 89196626-89200267 Lactuca sativa
Lsat_1_v5_gn_2_37361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 89196626-89197625 Lactuca sativa
Lsat_1_v5_gn_2_37361 2.0kb upstream 2.0kb upstream 4642   true Lsat_1_v8_lg_2: 89197626-89202267 Lactuca sativa
Lsat_1_v5_gn_2_37361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 89200268-89202267 Lactuca sativa
Lsat_1_v5_gn_2_37361 2.0kb downstream 2.0kb downstream 4642   true Lsat_1_v8_lg_2: 89195626-89200267 Lactuca sativa
Lsat_1_v5_gn_2_37361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 89195626-89197625 Lactuca sativa
Lsat_1_v5_gn_2_37361 5.0kb upstream 5.0kb upstream 7642   true Lsat_1_v8_lg_2: 89197626-89205267 Lactuca sativa
Lsat_1_v5_gn_2_37361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 89200268-89205267 Lactuca sativa
Lsat_1_v5_gn_2_37361 5.0kb downstream 5.0kb downstream 7642   true Lsat_1_v8_lg_2: 89192626-89200267 Lactuca sativa
Lsat_1_v5_gn_2_37361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 89192626-89197625 Lactuca sativa
Lsat_1_v5_gn_2_37361 10.0kb upstream 10.0kb upstream 12642   true Lsat_1_v8_lg_2: 89197626-89210267 Lactuca sativa
Lsat_1_v5_gn_2_37361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 89200268-89210267 Lactuca sativa
Lsat_1_v5_gn_2_37361 10.0kb downstream 10.0kb downstream 12642   true Lsat_1_v8_lg_2: 89187626-89200267 Lactuca sativa
Lsat_1_v5_gn_2_37361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 89187626-89197625 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473554 5263 Asterids View MSA
123740105 5271 Pentapetalae View MSA
122792386 5272 Eudicot View MSA
122043083 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain