Gene : Lsat_1_v5_gn_2_38680 L. sativa V8
Defline:  (1 of 3) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Genomic Order:  970
Name:  ? Lsat_1_v5_gn_2_38680 Secondary Identifier:  ? PAC:38957761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_38680 0.5kb upstream 0.5kb upstream 4201   true Lsat_1_v8_lg_2: 86716960-86721160 Lactuca sativa
Lsat_1_v5_gn_2_38680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 86720661-86721160 Lactuca sativa
Lsat_1_v5_gn_2_38680 0.5kb downstream 0.5kb downstream 4201   true Lsat_1_v8_lg_2: 86716460-86720660 Lactuca sativa
Lsat_1_v5_gn_2_38680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 86716460-86716959 Lactuca sativa
Lsat_1_v5_gn_2_38680 1.0kb upstream 1.0kb upstream 4701   true Lsat_1_v8_lg_2: 86716960-86721660 Lactuca sativa
Lsat_1_v5_gn_2_38680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 86720661-86721660 Lactuca sativa
Lsat_1_v5_gn_2_38680 1.0kb downstream 1.0kb downstream 4701   true Lsat_1_v8_lg_2: 86715960-86720660 Lactuca sativa
Lsat_1_v5_gn_2_38680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 86715960-86716959 Lactuca sativa
Lsat_1_v5_gn_2_38680 2.0kb upstream 2.0kb upstream 5701   true Lsat_1_v8_lg_2: 86716960-86722660 Lactuca sativa
Lsat_1_v5_gn_2_38680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 86720661-86722660 Lactuca sativa
Lsat_1_v5_gn_2_38680 2.0kb downstream 2.0kb downstream 5701   true Lsat_1_v8_lg_2: 86714960-86720660 Lactuca sativa
Lsat_1_v5_gn_2_38680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 86714960-86716959 Lactuca sativa
Lsat_1_v5_gn_2_38680 5.0kb upstream 5.0kb upstream 8701   true Lsat_1_v8_lg_2: 86716960-86725660 Lactuca sativa
Lsat_1_v5_gn_2_38680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 86720661-86725660 Lactuca sativa
Lsat_1_v5_gn_2_38680 5.0kb downstream 5.0kb downstream 8701   true Lsat_1_v8_lg_2: 86711960-86720660 Lactuca sativa
Lsat_1_v5_gn_2_38680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 86711960-86716959 Lactuca sativa
Lsat_1_v5_gn_2_38680 10.0kb upstream 10.0kb upstream 13701   true Lsat_1_v8_lg_2: 86716960-86730660 Lactuca sativa
Lsat_1_v5_gn_2_38680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 86720661-86730660 Lactuca sativa
Lsat_1_v5_gn_2_38680 10.0kb downstream 10.0kb downstream 13701   true Lsat_1_v8_lg_2: 86706960-86720660 Lactuca sativa
Lsat_1_v5_gn_2_38680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 86706960-86716959 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
121477960 5263 Asterids View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain