Gene : Lsat_1_v5_gn_2_38340 L. sativa V8
Defline:  (1 of 1) PTHR10133:SF22 - 5'-3' EXONUCLEASE FAMILY PROTEIN Genomic Order:  966
Name:  ? Lsat_1_v5_gn_2_38340 Secondary Identifier:  ? PAC:38957953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_38340 0.5kb upstream 0.5kb upstream 14667   true Lsat_1_v8_lg_2: 86273807-86288473 Lactuca sativa
Lsat_1_v5_gn_2_38340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 86287974-86288473 Lactuca sativa
Lsat_1_v5_gn_2_38340 0.5kb downstream 0.5kb downstream 14667   true Lsat_1_v8_lg_2: 86273307-86287973 Lactuca sativa
Lsat_1_v5_gn_2_38340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 86273307-86273806 Lactuca sativa
Lsat_1_v5_gn_2_38340 1.0kb upstream 1.0kb upstream 15167   true Lsat_1_v8_lg_2: 86273807-86288973 Lactuca sativa
Lsat_1_v5_gn_2_38340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 86287974-86288973 Lactuca sativa
Lsat_1_v5_gn_2_38340 1.0kb downstream 1.0kb downstream 15167   true Lsat_1_v8_lg_2: 86272807-86287973 Lactuca sativa
Lsat_1_v5_gn_2_38340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 86272807-86273806 Lactuca sativa
Lsat_1_v5_gn_2_38340 2.0kb upstream 2.0kb upstream 16167   true Lsat_1_v8_lg_2: 86273807-86289973 Lactuca sativa
Lsat_1_v5_gn_2_38340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 86287974-86289973 Lactuca sativa
Lsat_1_v5_gn_2_38340 2.0kb downstream 2.0kb downstream 16167   true Lsat_1_v8_lg_2: 86271807-86287973 Lactuca sativa
Lsat_1_v5_gn_2_38340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 86271807-86273806 Lactuca sativa
Lsat_1_v5_gn_2_38340 5.0kb upstream 5.0kb upstream 19167   true Lsat_1_v8_lg_2: 86273807-86292973 Lactuca sativa
Lsat_1_v5_gn_2_38340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 86287974-86292973 Lactuca sativa
Lsat_1_v5_gn_2_38340 5.0kb downstream 5.0kb downstream 19167   true Lsat_1_v8_lg_2: 86268807-86287973 Lactuca sativa
Lsat_1_v5_gn_2_38340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 86268807-86273806 Lactuca sativa
Lsat_1_v5_gn_2_38340 10.0kb upstream 10.0kb upstream 24167   true Lsat_1_v8_lg_2: 86273807-86297973 Lactuca sativa
Lsat_1_v5_gn_2_38340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 86287974-86297973 Lactuca sativa
Lsat_1_v5_gn_2_38340 10.0kb downstream 10.0kb downstream 24167   true Lsat_1_v8_lg_2: 86263807-86287973 Lactuca sativa
Lsat_1_v5_gn_2_38340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 86263807-86273806 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471558 5263 Asterids View MSA
123739108 5271 Pentapetalae View MSA
122787577 5272 Eudicot View MSA
122042646 5273 Angiosperm View MSA
121346899 5274 Embryophyte View MSA
123425715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain