Gene : Lsat_1_v5_gn_2_38240 L. sativa V8
Defline:  (1 of 2) K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1) Genomic Order:  971
Name:  ? Lsat_1_v5_gn_2_38240 Secondary Identifier:  ? PAC:38961280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_38240 0.5kb upstream 0.5kb upstream 13670   true Lsat_1_v8_lg_2: 87102155-87115824 Lactuca sativa
Lsat_1_v5_gn_2_38240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 87102155-87102654 Lactuca sativa
Lsat_1_v5_gn_2_38240 0.5kb downstream 0.5kb downstream 13670   true Lsat_1_v8_lg_2: 87102655-87116324 Lactuca sativa
Lsat_1_v5_gn_2_38240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 87115825-87116324 Lactuca sativa
Lsat_1_v5_gn_2_38240 1.0kb upstream 1.0kb upstream 14170   true Lsat_1_v8_lg_2: 87101655-87115824 Lactuca sativa
Lsat_1_v5_gn_2_38240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 87101655-87102654 Lactuca sativa
Lsat_1_v5_gn_2_38240 1.0kb downstream 1.0kb downstream 14170   true Lsat_1_v8_lg_2: 87102655-87116824 Lactuca sativa
Lsat_1_v5_gn_2_38240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 87115825-87116824 Lactuca sativa
Lsat_1_v5_gn_2_38240 2.0kb upstream 2.0kb upstream 15170   true Lsat_1_v8_lg_2: 87100655-87115824 Lactuca sativa
Lsat_1_v5_gn_2_38240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 87100655-87102654 Lactuca sativa
Lsat_1_v5_gn_2_38240 2.0kb downstream 2.0kb downstream 15170   true Lsat_1_v8_lg_2: 87102655-87117824 Lactuca sativa
Lsat_1_v5_gn_2_38240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 87115825-87117824 Lactuca sativa
Lsat_1_v5_gn_2_38240 5.0kb upstream 5.0kb upstream 18170   true Lsat_1_v8_lg_2: 87097655-87115824 Lactuca sativa
Lsat_1_v5_gn_2_38240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 87097655-87102654 Lactuca sativa
Lsat_1_v5_gn_2_38240 5.0kb downstream 5.0kb downstream 18170   true Lsat_1_v8_lg_2: 87102655-87120824 Lactuca sativa
Lsat_1_v5_gn_2_38240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 87115825-87120824 Lactuca sativa
Lsat_1_v5_gn_2_38240 10.0kb upstream 10.0kb upstream 23170   true Lsat_1_v8_lg_2: 87092655-87115824 Lactuca sativa
Lsat_1_v5_gn_2_38240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 87092655-87102654 Lactuca sativa
Lsat_1_v5_gn_2_38240 10.0kb downstream 10.0kb downstream 23170   true Lsat_1_v8_lg_2: 87102655-87125824 Lactuca sativa
Lsat_1_v5_gn_2_38240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 87115825-87125824 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469318 5263 Asterids View MSA
123752228 5271 Pentapetalae View MSA
122786822 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain