Gene : Lsat_1_v5_gn_2_40760 L. sativa V8
Defline:  (1 of 2) PTHR11960//PTHR11960:SF12 - EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED // EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4E Genomic Order:  1084
Name:  ? Lsat_1_v5_gn_2_40760 Secondary Identifier:  ? PAC:38959099
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_40760 0.5kb upstream 0.5kb upstream 2363   true Lsat_1_v8_lg_2: 96280583-96282945 Lactuca sativa
Lsat_1_v5_gn_2_40760 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 96280583-96281082 Lactuca sativa
Lsat_1_v5_gn_2_40760 0.5kb downstream 0.5kb downstream 2363   true Lsat_1_v8_lg_2: 96281083-96283445 Lactuca sativa
Lsat_1_v5_gn_2_40760 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 96282946-96283445 Lactuca sativa
Lsat_1_v5_gn_2_40760 1.0kb upstream 1.0kb upstream 2863   true Lsat_1_v8_lg_2: 96280083-96282945 Lactuca sativa
Lsat_1_v5_gn_2_40760 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 96280083-96281082 Lactuca sativa
Lsat_1_v5_gn_2_40760 1.0kb downstream 1.0kb downstream 2863   true Lsat_1_v8_lg_2: 96281083-96283945 Lactuca sativa
Lsat_1_v5_gn_2_40760 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 96282946-96283945 Lactuca sativa
Lsat_1_v5_gn_2_40760 2.0kb upstream 2.0kb upstream 3863   true Lsat_1_v8_lg_2: 96279083-96282945 Lactuca sativa
Lsat_1_v5_gn_2_40760 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 96279083-96281082 Lactuca sativa
Lsat_1_v5_gn_2_40760 2.0kb downstream 2.0kb downstream 3863   true Lsat_1_v8_lg_2: 96281083-96284945 Lactuca sativa
Lsat_1_v5_gn_2_40760 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 96282946-96284945 Lactuca sativa
Lsat_1_v5_gn_2_40760 5.0kb upstream 5.0kb upstream 6863   true Lsat_1_v8_lg_2: 96276083-96282945 Lactuca sativa
Lsat_1_v5_gn_2_40760 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 96276083-96281082 Lactuca sativa
Lsat_1_v5_gn_2_40760 5.0kb downstream 5.0kb downstream 6863   true Lsat_1_v8_lg_2: 96281083-96287945 Lactuca sativa
Lsat_1_v5_gn_2_40760 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 96282946-96287945 Lactuca sativa
Lsat_1_v5_gn_2_40760 10.0kb upstream 10.0kb upstream 11863   true Lsat_1_v8_lg_2: 96271083-96282945 Lactuca sativa
Lsat_1_v5_gn_2_40760 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 96271083-96281082 Lactuca sativa
Lsat_1_v5_gn_2_40760 10.0kb downstream 10.0kb downstream 11863   true Lsat_1_v8_lg_2: 96281083-96292945 Lactuca sativa
Lsat_1_v5_gn_2_40760 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 96282946-96292945 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467415 5263 Asterids View MSA
123737003 5271 Pentapetalae View MSA
122788011 5272 Eudicot View MSA
122048910 5273 Angiosperm View MSA
121311166 5274 Embryophyte View MSA
123428039 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain