Gene : Lsat_1_v5_gn_2_41261 L. sativa V8
Defline:  (1 of 36) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  1075
Name:  ? Lsat_1_v5_gn_2_41261 Secondary Identifier:  ? PAC:38962574
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_41261 0.5kb upstream 0.5kb upstream 2198   true Lsat_1_v8_lg_2: 95606945-95609142 Lactuca sativa
Lsat_1_v5_gn_2_41261 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 95608643-95609142 Lactuca sativa
Lsat_1_v5_gn_2_41261 0.5kb downstream 0.5kb downstream 2198   true Lsat_1_v8_lg_2: 95606445-95608642 Lactuca sativa
Lsat_1_v5_gn_2_41261 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 95606445-95606944 Lactuca sativa
Lsat_1_v5_gn_2_41261 1.0kb upstream 1.0kb upstream 2698   true Lsat_1_v8_lg_2: 95606945-95609642 Lactuca sativa
Lsat_1_v5_gn_2_41261 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 95608643-95609642 Lactuca sativa
Lsat_1_v5_gn_2_41261 1.0kb downstream 1.0kb downstream 2698   true Lsat_1_v8_lg_2: 95605945-95608642 Lactuca sativa
Lsat_1_v5_gn_2_41261 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 95605945-95606944 Lactuca sativa
Lsat_1_v5_gn_2_41261 2.0kb upstream 2.0kb upstream 3698   true Lsat_1_v8_lg_2: 95606945-95610642 Lactuca sativa
Lsat_1_v5_gn_2_41261 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 95608643-95610642 Lactuca sativa
Lsat_1_v5_gn_2_41261 2.0kb downstream 2.0kb downstream 3698   true Lsat_1_v8_lg_2: 95604945-95608642 Lactuca sativa
Lsat_1_v5_gn_2_41261 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 95604945-95606944 Lactuca sativa
Lsat_1_v5_gn_2_41261 5.0kb upstream 5.0kb upstream 6698   true Lsat_1_v8_lg_2: 95606945-95613642 Lactuca sativa
Lsat_1_v5_gn_2_41261 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 95608643-95613642 Lactuca sativa
Lsat_1_v5_gn_2_41261 5.0kb downstream 5.0kb downstream 6698   true Lsat_1_v8_lg_2: 95601945-95608642 Lactuca sativa
Lsat_1_v5_gn_2_41261 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 95601945-95606944 Lactuca sativa
Lsat_1_v5_gn_2_41261 10.0kb upstream 10.0kb upstream 11698   true Lsat_1_v8_lg_2: 95606945-95618642 Lactuca sativa
Lsat_1_v5_gn_2_41261 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 95608643-95618642 Lactuca sativa
Lsat_1_v5_gn_2_41261 10.0kb downstream 10.0kb downstream 11698   true Lsat_1_v8_lg_2: 95596945-95608642 Lactuca sativa
Lsat_1_v5_gn_2_41261 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 95596945-95606944 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470136 5263 Asterids View MSA
123738370 5271 Pentapetalae View MSA
122790511 5272 Eudicot View MSA
122043782 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain