Gene : Lsat_1_v5_gn_2_43880 L. sativa V8
Defline:  (1 of 5) PTHR33288//PTHR33288:SF3 - FAMILY NOT NAMED // APOCYTOCHROME F Genomic Order:  1132
Name:  ? Lsat_1_v5_gn_2_43880 Secondary Identifier:  ? PAC:38960700
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_43880 0.5kb upstream 0.5kb upstream 7838   true Lsat_1_v8_lg_2: 101045278-101053115 Lactuca sativa
Lsat_1_v5_gn_2_43880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 101045278-101045777 Lactuca sativa
Lsat_1_v5_gn_2_43880 0.5kb downstream 0.5kb downstream 7838   true Lsat_1_v8_lg_2: 101045778-101053615 Lactuca sativa
Lsat_1_v5_gn_2_43880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 101053116-101053615 Lactuca sativa
Lsat_1_v5_gn_2_43880 1.0kb upstream 1.0kb upstream 8338   true Lsat_1_v8_lg_2: 101044778-101053115 Lactuca sativa
Lsat_1_v5_gn_2_43880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 101044778-101045777 Lactuca sativa
Lsat_1_v5_gn_2_43880 1.0kb downstream 1.0kb downstream 8338   true Lsat_1_v8_lg_2: 101045778-101054115 Lactuca sativa
Lsat_1_v5_gn_2_43880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 101053116-101054115 Lactuca sativa
Lsat_1_v5_gn_2_43880 2.0kb upstream 2.0kb upstream 9338   true Lsat_1_v8_lg_2: 101043778-101053115 Lactuca sativa
Lsat_1_v5_gn_2_43880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 101043778-101045777 Lactuca sativa
Lsat_1_v5_gn_2_43880 2.0kb downstream 2.0kb downstream 9338   true Lsat_1_v8_lg_2: 101045778-101055115 Lactuca sativa
Lsat_1_v5_gn_2_43880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 101053116-101055115 Lactuca sativa
Lsat_1_v5_gn_2_43880 5.0kb upstream 5.0kb upstream 12338   true Lsat_1_v8_lg_2: 101040778-101053115 Lactuca sativa
Lsat_1_v5_gn_2_43880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 101040778-101045777 Lactuca sativa
Lsat_1_v5_gn_2_43880 5.0kb downstream 5.0kb downstream 12338   true Lsat_1_v8_lg_2: 101045778-101058115 Lactuca sativa
Lsat_1_v5_gn_2_43880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 101053116-101058115 Lactuca sativa
Lsat_1_v5_gn_2_43880 10.0kb upstream 10.0kb upstream 17338   true Lsat_1_v8_lg_2: 101035778-101053115 Lactuca sativa
Lsat_1_v5_gn_2_43880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 101035778-101045777 Lactuca sativa
Lsat_1_v5_gn_2_43880 10.0kb downstream 10.0kb downstream 17338   true Lsat_1_v8_lg_2: 101045778-101063115 Lactuca sativa
Lsat_1_v5_gn_2_43880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 101053116-101063115 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482867 5263 Asterids View MSA
123752202 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain