Gene : Lsat_1_v5_gn_2_84561 L. sativa V8
Defline:  (1 of 3) PTHR23315//PTHR23315:SF117 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  2317
Name:  ? Lsat_1_v5_gn_2_84561 Secondary Identifier:  ? PAC:38960999
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_84561 0.5kb upstream 0.5kb upstream 4150   true Lsat_1_v8_lg_2: 160426056-160430205 Lactuca sativa
Lsat_1_v5_gn_2_84561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 160429706-160430205 Lactuca sativa
Lsat_1_v5_gn_2_84561 0.5kb downstream 0.5kb downstream 4150   true Lsat_1_v8_lg_2: 160425556-160429705 Lactuca sativa
Lsat_1_v5_gn_2_84561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 160425556-160426055 Lactuca sativa
Lsat_1_v5_gn_2_84561 1.0kb upstream 1.0kb upstream 4650   true Lsat_1_v8_lg_2: 160426056-160430705 Lactuca sativa
Lsat_1_v5_gn_2_84561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 160429706-160430705 Lactuca sativa
Lsat_1_v5_gn_2_84561 1.0kb downstream 1.0kb downstream 4650   true Lsat_1_v8_lg_2: 160425056-160429705 Lactuca sativa
Lsat_1_v5_gn_2_84561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 160425056-160426055 Lactuca sativa
Lsat_1_v5_gn_2_84561 2.0kb upstream 2.0kb upstream 5650   true Lsat_1_v8_lg_2: 160426056-160431705 Lactuca sativa
Lsat_1_v5_gn_2_84561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 160429706-160431705 Lactuca sativa
Lsat_1_v5_gn_2_84561 2.0kb downstream 2.0kb downstream 5650   true Lsat_1_v8_lg_2: 160424056-160429705 Lactuca sativa
Lsat_1_v5_gn_2_84561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 160424056-160426055 Lactuca sativa
Lsat_1_v5_gn_2_84561 5.0kb upstream 5.0kb upstream 8650   true Lsat_1_v8_lg_2: 160426056-160434705 Lactuca sativa
Lsat_1_v5_gn_2_84561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 160429706-160434705 Lactuca sativa
Lsat_1_v5_gn_2_84561 5.0kb downstream 5.0kb downstream 8650   true Lsat_1_v8_lg_2: 160421056-160429705 Lactuca sativa
Lsat_1_v5_gn_2_84561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 160421056-160426055 Lactuca sativa
Lsat_1_v5_gn_2_84561 10.0kb upstream 10.0kb upstream 13650   true Lsat_1_v8_lg_2: 160426056-160439705 Lactuca sativa
Lsat_1_v5_gn_2_84561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 160429706-160439705 Lactuca sativa
Lsat_1_v5_gn_2_84561 10.0kb downstream 10.0kb downstream 13650   true Lsat_1_v8_lg_2: 160416056-160429705 Lactuca sativa
Lsat_1_v5_gn_2_84561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 160416056-160426055 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477382 5263 Asterids View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain