Gene : Lsat_1_v5_gn_2_84360 L. sativa V8
Defline:  (1 of 1) 1.1.1.102//1.1.1.62 - 3-dehydrosphinganine reductase / KTS reductase // 17-beta-estradiol 17-dehydrogenase / Estrogen 17-oxidoreductase Genomic Order:  2380
Name:  ? Lsat_1_v5_gn_2_84360 Secondary Identifier:  ? PAC:38959079
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5129 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_84360 0.5kb upstream 0.5kb upstream 2967   true Lsat_1_v8_lg_2: 163660984-163663950 Lactuca sativa
Lsat_1_v5_gn_2_84360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 163660984-163661483 Lactuca sativa
Lsat_1_v5_gn_2_84360 0.5kb downstream 0.5kb downstream 2967   true Lsat_1_v8_lg_2: 163661484-163664450 Lactuca sativa
Lsat_1_v5_gn_2_84360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 163663951-163664450 Lactuca sativa
Lsat_1_v5_gn_2_84360 1.0kb upstream 1.0kb upstream 3467   true Lsat_1_v8_lg_2: 163660484-163663950 Lactuca sativa
Lsat_1_v5_gn_2_84360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 163660484-163661483 Lactuca sativa
Lsat_1_v5_gn_2_84360 1.0kb downstream 1.0kb downstream 3467   true Lsat_1_v8_lg_2: 163661484-163664950 Lactuca sativa
Lsat_1_v5_gn_2_84360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 163663951-163664950 Lactuca sativa
Lsat_1_v5_gn_2_84360 2.0kb upstream 2.0kb upstream 4467   true Lsat_1_v8_lg_2: 163659484-163663950 Lactuca sativa
Lsat_1_v5_gn_2_84360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 163659484-163661483 Lactuca sativa
Lsat_1_v5_gn_2_84360 2.0kb downstream 2.0kb downstream 4467   true Lsat_1_v8_lg_2: 163661484-163665950 Lactuca sativa
Lsat_1_v5_gn_2_84360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 163663951-163665950 Lactuca sativa
Lsat_1_v5_gn_2_84360 5.0kb upstream 5.0kb upstream 7467   true Lsat_1_v8_lg_2: 163656484-163663950 Lactuca sativa
Lsat_1_v5_gn_2_84360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 163656484-163661483 Lactuca sativa
Lsat_1_v5_gn_2_84360 5.0kb downstream 5.0kb downstream 7467   true Lsat_1_v8_lg_2: 163661484-163668950 Lactuca sativa
Lsat_1_v5_gn_2_84360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 163663951-163668950 Lactuca sativa
Lsat_1_v5_gn_2_84360 10.0kb upstream 10.0kb upstream 12467   true Lsat_1_v8_lg_2: 163651484-163663950 Lactuca sativa
Lsat_1_v5_gn_2_84360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 163651484-163661483 Lactuca sativa
Lsat_1_v5_gn_2_84360 10.0kb downstream 10.0kb downstream 12467   true Lsat_1_v8_lg_2: 163661484-163673950 Lactuca sativa
Lsat_1_v5_gn_2_84360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 163663951-163673950 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478048 5263 Asterids View MSA
123736848 5271 Pentapetalae View MSA
122788663 5272 Eudicot View MSA
122042834 5273 Angiosperm View MSA
121346352 5274 Embryophyte View MSA
123423987 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain