Gene : Lsat_1_v5_gn_2_84220 L. sativa V8
Defline:  (1 of 2) PTHR10891//PTHR10891:SF533 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2376
Name:  ? Lsat_1_v5_gn_2_84220 Secondary Identifier:  ? PAC:38958992
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_84220 0.5kb upstream 0.5kb upstream 1321   true Lsat_1_v8_lg_2: 163415852-163417172 Lactuca sativa
Lsat_1_v5_gn_2_84220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 163415852-163416351 Lactuca sativa
Lsat_1_v5_gn_2_84220 0.5kb downstream 0.5kb downstream 1321   true Lsat_1_v8_lg_2: 163416352-163417672 Lactuca sativa
Lsat_1_v5_gn_2_84220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 163417173-163417672 Lactuca sativa
Lsat_1_v5_gn_2_84220 1.0kb upstream 1.0kb upstream 1821   true Lsat_1_v8_lg_2: 163415352-163417172 Lactuca sativa
Lsat_1_v5_gn_2_84220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 163415352-163416351 Lactuca sativa
Lsat_1_v5_gn_2_84220 1.0kb downstream 1.0kb downstream 1821   true Lsat_1_v8_lg_2: 163416352-163418172 Lactuca sativa
Lsat_1_v5_gn_2_84220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 163417173-163418172 Lactuca sativa
Lsat_1_v5_gn_2_84220 2.0kb upstream 2.0kb upstream 2821   true Lsat_1_v8_lg_2: 163414352-163417172 Lactuca sativa
Lsat_1_v5_gn_2_84220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 163414352-163416351 Lactuca sativa
Lsat_1_v5_gn_2_84220 2.0kb downstream 2.0kb downstream 2821   true Lsat_1_v8_lg_2: 163416352-163419172 Lactuca sativa
Lsat_1_v5_gn_2_84220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 163417173-163419172 Lactuca sativa
Lsat_1_v5_gn_2_84220 5.0kb upstream 5.0kb upstream 5821   true Lsat_1_v8_lg_2: 163411352-163417172 Lactuca sativa
Lsat_1_v5_gn_2_84220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 163411352-163416351 Lactuca sativa
Lsat_1_v5_gn_2_84220 5.0kb downstream 5.0kb downstream 5821   true Lsat_1_v8_lg_2: 163416352-163422172 Lactuca sativa
Lsat_1_v5_gn_2_84220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 163417173-163422172 Lactuca sativa
Lsat_1_v5_gn_2_84220 10.0kb upstream 10.0kb upstream 10821   true Lsat_1_v8_lg_2: 163406352-163417172 Lactuca sativa
Lsat_1_v5_gn_2_84220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 163406352-163416351 Lactuca sativa
Lsat_1_v5_gn_2_84220 10.0kb downstream 10.0kb downstream 10821   true Lsat_1_v8_lg_2: 163416352-163427172 Lactuca sativa
Lsat_1_v5_gn_2_84220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 163417173-163427172 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478852 5263 Asterids View MSA
123753496 5271 Pentapetalae View MSA
122789442 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain