Gene : Lsat_1_v5_gn_2_85661 L. sativa V8
Defline:  (1 of 59) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  2335
Name:  ? Lsat_1_v5_gn_2_85661 Secondary Identifier:  ? PAC:38958022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_85661 0.5kb upstream 0.5kb upstream 2159   true Lsat_1_v8_lg_2: 161525660-161527818 Lactuca sativa
Lsat_1_v5_gn_2_85661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 161527319-161527818 Lactuca sativa
Lsat_1_v5_gn_2_85661 0.5kb downstream 0.5kb downstream 2159   true Lsat_1_v8_lg_2: 161525160-161527318 Lactuca sativa
Lsat_1_v5_gn_2_85661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 161525160-161525659 Lactuca sativa
Lsat_1_v5_gn_2_85661 1.0kb upstream 1.0kb upstream 2659   true Lsat_1_v8_lg_2: 161525660-161528318 Lactuca sativa
Lsat_1_v5_gn_2_85661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 161527319-161528318 Lactuca sativa
Lsat_1_v5_gn_2_85661 1.0kb downstream 1.0kb downstream 2659   true Lsat_1_v8_lg_2: 161524660-161527318 Lactuca sativa
Lsat_1_v5_gn_2_85661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 161524660-161525659 Lactuca sativa
Lsat_1_v5_gn_2_85661 2.0kb upstream 2.0kb upstream 3659   true Lsat_1_v8_lg_2: 161525660-161529318 Lactuca sativa
Lsat_1_v5_gn_2_85661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 161527319-161529318 Lactuca sativa
Lsat_1_v5_gn_2_85661 2.0kb downstream 2.0kb downstream 3659   true Lsat_1_v8_lg_2: 161523660-161527318 Lactuca sativa
Lsat_1_v5_gn_2_85661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 161523660-161525659 Lactuca sativa
Lsat_1_v5_gn_2_85661 5.0kb upstream 5.0kb upstream 6659   true Lsat_1_v8_lg_2: 161525660-161532318 Lactuca sativa
Lsat_1_v5_gn_2_85661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 161527319-161532318 Lactuca sativa
Lsat_1_v5_gn_2_85661 5.0kb downstream 5.0kb downstream 6659   true Lsat_1_v8_lg_2: 161520660-161527318 Lactuca sativa
Lsat_1_v5_gn_2_85661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 161520660-161525659 Lactuca sativa
Lsat_1_v5_gn_2_85661 10.0kb upstream 10.0kb upstream 11659   true Lsat_1_v8_lg_2: 161525660-161537318 Lactuca sativa
Lsat_1_v5_gn_2_85661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 161527319-161537318 Lactuca sativa
Lsat_1_v5_gn_2_85661 10.0kb downstream 10.0kb downstream 11659   true Lsat_1_v8_lg_2: 161515660-161527318 Lactuca sativa
Lsat_1_v5_gn_2_85661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 161515660-161525659 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468130 5263 Asterids View MSA
123737351 5271 Pentapetalae View MSA
122791166 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain