Gene : Lsat_1_v5_gn_2_84981 L. sativa V8
Defline:  (1 of 2) K00763 - nicotinate phosphoribosyltransferase (pncB, NAPRT1) Genomic Order:  2361
Name:  ? Lsat_1_v5_gn_2_84981 Secondary Identifier:  ? PAC:38962224
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5381 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_84981 0.5kb upstream 0.5kb upstream 4774   true Lsat_1_v8_lg_2: 162705922-162710695 Lactuca sativa
Lsat_1_v5_gn_2_84981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 162705922-162706421 Lactuca sativa
Lsat_1_v5_gn_2_84981 0.5kb downstream 0.5kb downstream 4774   true Lsat_1_v8_lg_2: 162706422-162711195 Lactuca sativa
Lsat_1_v5_gn_2_84981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 162710696-162711195 Lactuca sativa
Lsat_1_v5_gn_2_84981 1.0kb upstream 1.0kb upstream 5274   true Lsat_1_v8_lg_2: 162705422-162710695 Lactuca sativa
Lsat_1_v5_gn_2_84981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 162705422-162706421 Lactuca sativa
Lsat_1_v5_gn_2_84981 1.0kb downstream 1.0kb downstream 5274   true Lsat_1_v8_lg_2: 162706422-162711695 Lactuca sativa
Lsat_1_v5_gn_2_84981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 162710696-162711695 Lactuca sativa
Lsat_1_v5_gn_2_84981 2.0kb upstream 2.0kb upstream 6274   true Lsat_1_v8_lg_2: 162704422-162710695 Lactuca sativa
Lsat_1_v5_gn_2_84981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 162704422-162706421 Lactuca sativa
Lsat_1_v5_gn_2_84981 2.0kb downstream 2.0kb downstream 6274   true Lsat_1_v8_lg_2: 162706422-162712695 Lactuca sativa
Lsat_1_v5_gn_2_84981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 162710696-162712695 Lactuca sativa
Lsat_1_v5_gn_2_84981 5.0kb upstream 5.0kb upstream 9274   true Lsat_1_v8_lg_2: 162701422-162710695 Lactuca sativa
Lsat_1_v5_gn_2_84981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 162701422-162706421 Lactuca sativa
Lsat_1_v5_gn_2_84981 5.0kb downstream 5.0kb downstream 9274   true Lsat_1_v8_lg_2: 162706422-162715695 Lactuca sativa
Lsat_1_v5_gn_2_84981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 162710696-162715695 Lactuca sativa
Lsat_1_v5_gn_2_84981 10.0kb upstream 10.0kb upstream 14274   true Lsat_1_v8_lg_2: 162696422-162710695 Lactuca sativa
Lsat_1_v5_gn_2_84981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 162696422-162706421 Lactuca sativa
Lsat_1_v5_gn_2_84981 10.0kb downstream 10.0kb downstream 14274   true Lsat_1_v8_lg_2: 162706422-162720695 Lactuca sativa
Lsat_1_v5_gn_2_84981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 162710696-162720695 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478812 5263 Asterids View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain