Gene : Lsat_1_v5_gn_2_88360 L. sativa V8
Defline:  (1 of 3) K00703 - starch synthase (E2.4.1.21, glgA) Genomic Order:  2522
Name:  ? Lsat_1_v5_gn_2_88360 Secondary Identifier:  ? PAC:38962223
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLYCOGENSYNTH-PWY Lactuca sativa pathologic  
Lsativa PWY-622 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_88360 0.5kb upstream 0.5kb upstream 4513   true Lsat_1_v8_lg_2: 167012884-167017396 Lactuca sativa
Lsat_1_v5_gn_2_88360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 167016897-167017396 Lactuca sativa
Lsat_1_v5_gn_2_88360 0.5kb downstream 0.5kb downstream 4513   true Lsat_1_v8_lg_2: 167012384-167016896 Lactuca sativa
Lsat_1_v5_gn_2_88360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 167012384-167012883 Lactuca sativa
Lsat_1_v5_gn_2_88360 1.0kb upstream 1.0kb upstream 5013   true Lsat_1_v8_lg_2: 167012884-167017896 Lactuca sativa
Lsat_1_v5_gn_2_88360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 167016897-167017896 Lactuca sativa
Lsat_1_v5_gn_2_88360 1.0kb downstream 1.0kb downstream 5013   true Lsat_1_v8_lg_2: 167011884-167016896 Lactuca sativa
Lsat_1_v5_gn_2_88360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 167011884-167012883 Lactuca sativa
Lsat_1_v5_gn_2_88360 2.0kb upstream 2.0kb upstream 6013   true Lsat_1_v8_lg_2: 167012884-167018896 Lactuca sativa
Lsat_1_v5_gn_2_88360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 167016897-167018896 Lactuca sativa
Lsat_1_v5_gn_2_88360 2.0kb downstream 2.0kb downstream 6013   true Lsat_1_v8_lg_2: 167010884-167016896 Lactuca sativa
Lsat_1_v5_gn_2_88360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 167010884-167012883 Lactuca sativa
Lsat_1_v5_gn_2_88360 5.0kb upstream 5.0kb upstream 9013   true Lsat_1_v8_lg_2: 167012884-167021896 Lactuca sativa
Lsat_1_v5_gn_2_88360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 167016897-167021896 Lactuca sativa
Lsat_1_v5_gn_2_88360 5.0kb downstream 5.0kb downstream 9013   true Lsat_1_v8_lg_2: 167007884-167016896 Lactuca sativa
Lsat_1_v5_gn_2_88360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 167007884-167012883 Lactuca sativa
Lsat_1_v5_gn_2_88360 10.0kb upstream 10.0kb upstream 14013   true Lsat_1_v8_lg_2: 167012884-167026896 Lactuca sativa
Lsat_1_v5_gn_2_88360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 167016897-167026896 Lactuca sativa
Lsat_1_v5_gn_2_88360 10.0kb downstream 10.0kb downstream 14013   true Lsat_1_v8_lg_2: 167002884-167016896 Lactuca sativa
Lsat_1_v5_gn_2_88360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 167002884-167012883 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472721 5263 Asterids View MSA
123744003 5271 Pentapetalae View MSA
122787814 5272 Eudicot View MSA
122042262 5273 Angiosperm View MSA
121347324 5274 Embryophyte View MSA
123426751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain