Gene : Lsat_1_v5_gn_2_87921 L. sativa V8
Defline:  (1 of 1) PTHR11638//PTHR11638:SF121 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC Genomic Order:  2491
Name:  ? Lsat_1_v5_gn_2_87921 Secondary Identifier:  ? PAC:38960337
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_87921 0.5kb upstream 0.5kb upstream 5047   true Lsat_1_v8_lg_2: 166382455-166387501 Lactuca sativa
Lsat_1_v5_gn_2_87921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 166382455-166382954 Lactuca sativa
Lsat_1_v5_gn_2_87921 0.5kb downstream 0.5kb downstream 5047   true Lsat_1_v8_lg_2: 166382955-166388001 Lactuca sativa
Lsat_1_v5_gn_2_87921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 166387502-166388001 Lactuca sativa
Lsat_1_v5_gn_2_87921 1.0kb upstream 1.0kb upstream 5547   true Lsat_1_v8_lg_2: 166381955-166387501 Lactuca sativa
Lsat_1_v5_gn_2_87921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 166381955-166382954 Lactuca sativa
Lsat_1_v5_gn_2_87921 1.0kb downstream 1.0kb downstream 5547   true Lsat_1_v8_lg_2: 166382955-166388501 Lactuca sativa
Lsat_1_v5_gn_2_87921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 166387502-166388501 Lactuca sativa
Lsat_1_v5_gn_2_87921 2.0kb upstream 2.0kb upstream 6547   true Lsat_1_v8_lg_2: 166380955-166387501 Lactuca sativa
Lsat_1_v5_gn_2_87921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 166380955-166382954 Lactuca sativa
Lsat_1_v5_gn_2_87921 2.0kb downstream 2.0kb downstream 6547   true Lsat_1_v8_lg_2: 166382955-166389501 Lactuca sativa
Lsat_1_v5_gn_2_87921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 166387502-166389501 Lactuca sativa
Lsat_1_v5_gn_2_87921 5.0kb upstream 5.0kb upstream 9547   true Lsat_1_v8_lg_2: 166377955-166387501 Lactuca sativa
Lsat_1_v5_gn_2_87921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 166377955-166382954 Lactuca sativa
Lsat_1_v5_gn_2_87921 5.0kb downstream 5.0kb downstream 9547   true Lsat_1_v8_lg_2: 166382955-166392501 Lactuca sativa
Lsat_1_v5_gn_2_87921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 166387502-166392501 Lactuca sativa
Lsat_1_v5_gn_2_87921 10.0kb upstream 10.0kb upstream 14547   true Lsat_1_v8_lg_2: 166372955-166387501 Lactuca sativa
Lsat_1_v5_gn_2_87921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 166372955-166382954 Lactuca sativa
Lsat_1_v5_gn_2_87921 10.0kb downstream 10.0kb downstream 14547   true Lsat_1_v8_lg_2: 166382955-166397501 Lactuca sativa
Lsat_1_v5_gn_2_87921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 166387502-166397501 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472246 5263 Asterids View MSA
123743206 5271 Pentapetalae View MSA
122792663 5272 Eudicot View MSA
122044164 5273 Angiosperm View MSA
121345857 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain