Gene : Lsat_1_v5_gn_2_89601 L. sativa V8
Defline:  (1 of 11) PF04833 - COBRA-like protein (COBRA) Genomic Order:  2450
Name:  ? Lsat_1_v5_gn_2_89601 Secondary Identifier:  ? PAC:38961516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_89601 0.5kb upstream 0.5kb upstream 2426   true Lsat_1_v8_lg_2: 165271096-165273521 Lactuca sativa
Lsat_1_v5_gn_2_89601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 165273022-165273521 Lactuca sativa
Lsat_1_v5_gn_2_89601 0.5kb downstream 0.5kb downstream 2426   true Lsat_1_v8_lg_2: 165270596-165273021 Lactuca sativa
Lsat_1_v5_gn_2_89601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 165270596-165271095 Lactuca sativa
Lsat_1_v5_gn_2_89601 1.0kb upstream 1.0kb upstream 2926   true Lsat_1_v8_lg_2: 165271096-165274021 Lactuca sativa
Lsat_1_v5_gn_2_89601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 165273022-165274021 Lactuca sativa
Lsat_1_v5_gn_2_89601 1.0kb downstream 1.0kb downstream 2926   true Lsat_1_v8_lg_2: 165270096-165273021 Lactuca sativa
Lsat_1_v5_gn_2_89601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 165270096-165271095 Lactuca sativa
Lsat_1_v5_gn_2_89601 2.0kb upstream 2.0kb upstream 3926   true Lsat_1_v8_lg_2: 165271096-165275021 Lactuca sativa
Lsat_1_v5_gn_2_89601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 165273022-165275021 Lactuca sativa
Lsat_1_v5_gn_2_89601 2.0kb downstream 2.0kb downstream 3926   true Lsat_1_v8_lg_2: 165269096-165273021 Lactuca sativa
Lsat_1_v5_gn_2_89601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 165269096-165271095 Lactuca sativa
Lsat_1_v5_gn_2_89601 5.0kb upstream 5.0kb upstream 6926   true Lsat_1_v8_lg_2: 165271096-165278021 Lactuca sativa
Lsat_1_v5_gn_2_89601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 165273022-165278021 Lactuca sativa
Lsat_1_v5_gn_2_89601 5.0kb downstream 5.0kb downstream 6926   true Lsat_1_v8_lg_2: 165266096-165273021 Lactuca sativa
Lsat_1_v5_gn_2_89601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 165266096-165271095 Lactuca sativa
Lsat_1_v5_gn_2_89601 10.0kb upstream 10.0kb upstream 11926   true Lsat_1_v8_lg_2: 165271096-165283021 Lactuca sativa
Lsat_1_v5_gn_2_89601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 165273022-165283021 Lactuca sativa
Lsat_1_v5_gn_2_89601 10.0kb downstream 10.0kb downstream 11926   true Lsat_1_v8_lg_2: 165261096-165273021 Lactuca sativa
Lsat_1_v5_gn_2_89601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 165261096-165271095 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479331 5263 Asterids View MSA
123751474 5271 Pentapetalae View MSA
122774032 5272 Eudicot View MSA
122041862 5273 Angiosperm View MSA
121309895 5274 Embryophyte View MSA
123347529 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain