Gene : Lsat_1_v5_gn_2_89521 L. sativa V8
Defline:  (1 of 3) PTHR31680:SF4 - PROTEIN LONGIFOLIA 1-RELATED Genomic Order:  2447
Name:  ? Lsat_1_v5_gn_2_89521 Secondary Identifier:  ? PAC:38959919
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_89521 0.5kb upstream 0.5kb upstream 12544   true Lsat_1_v8_lg_2: 165186891-165199434 Lactuca sativa
Lsat_1_v5_gn_2_89521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 165198935-165199434 Lactuca sativa
Lsat_1_v5_gn_2_89521 0.5kb downstream 0.5kb downstream 12544   true Lsat_1_v8_lg_2: 165186391-165198934 Lactuca sativa
Lsat_1_v5_gn_2_89521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 165186391-165186890 Lactuca sativa
Lsat_1_v5_gn_2_89521 1.0kb upstream 1.0kb upstream 13044   true Lsat_1_v8_lg_2: 165186891-165199934 Lactuca sativa
Lsat_1_v5_gn_2_89521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 165198935-165199934 Lactuca sativa
Lsat_1_v5_gn_2_89521 1.0kb downstream 1.0kb downstream 13044   true Lsat_1_v8_lg_2: 165185891-165198934 Lactuca sativa
Lsat_1_v5_gn_2_89521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 165185891-165186890 Lactuca sativa
Lsat_1_v5_gn_2_89521 2.0kb upstream 2.0kb upstream 14044   true Lsat_1_v8_lg_2: 165186891-165200934 Lactuca sativa
Lsat_1_v5_gn_2_89521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 165198935-165200934 Lactuca sativa
Lsat_1_v5_gn_2_89521 2.0kb downstream 2.0kb downstream 14044   true Lsat_1_v8_lg_2: 165184891-165198934 Lactuca sativa
Lsat_1_v5_gn_2_89521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 165184891-165186890 Lactuca sativa
Lsat_1_v5_gn_2_89521 5.0kb upstream 5.0kb upstream 17044   true Lsat_1_v8_lg_2: 165186891-165203934 Lactuca sativa
Lsat_1_v5_gn_2_89521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 165198935-165203934 Lactuca sativa
Lsat_1_v5_gn_2_89521 5.0kb downstream 5.0kb downstream 17044   true Lsat_1_v8_lg_2: 165181891-165198934 Lactuca sativa
Lsat_1_v5_gn_2_89521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 165181891-165186890 Lactuca sativa
Lsat_1_v5_gn_2_89521 10.0kb upstream 10.0kb upstream 22044   true Lsat_1_v8_lg_2: 165186891-165208934 Lactuca sativa
Lsat_1_v5_gn_2_89521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 165198935-165208934 Lactuca sativa
Lsat_1_v5_gn_2_89521 10.0kb downstream 10.0kb downstream 22044   true Lsat_1_v8_lg_2: 165176891-165198934 Lactuca sativa
Lsat_1_v5_gn_2_89521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 165176891-165186890 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026676 5273 Angiosperm View MSA
121474235 5263 Asterids View MSA
123746189 5271 Pentapetalae View MSA
122771811 5272 Eudicot View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain