Gene : Lsat_1_v5_gn_2_88641 L. sativa V8
Defline:  (1 of 2) K09272 - structure-specific recognition protein 1 (SSRP1) Genomic Order:  2548
Name:  ? Lsat_1_v5_gn_2_88641 Secondary Identifier:  ? PAC:38962433
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_88641 0.5kb upstream 0.5kb upstream 4751   true Lsat_1_v8_lg_2: 167800545-167805295 Lactuca sativa
Lsat_1_v5_gn_2_88641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 167800545-167801044 Lactuca sativa
Lsat_1_v5_gn_2_88641 0.5kb downstream 0.5kb downstream 4751   true Lsat_1_v8_lg_2: 167801045-167805795 Lactuca sativa
Lsat_1_v5_gn_2_88641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 167805296-167805795 Lactuca sativa
Lsat_1_v5_gn_2_88641 1.0kb upstream 1.0kb upstream 5251   true Lsat_1_v8_lg_2: 167800045-167805295 Lactuca sativa
Lsat_1_v5_gn_2_88641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 167800045-167801044 Lactuca sativa
Lsat_1_v5_gn_2_88641 1.0kb downstream 1.0kb downstream 5251   true Lsat_1_v8_lg_2: 167801045-167806295 Lactuca sativa
Lsat_1_v5_gn_2_88641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 167805296-167806295 Lactuca sativa
Lsat_1_v5_gn_2_88641 2.0kb upstream 2.0kb upstream 6251   true Lsat_1_v8_lg_2: 167799045-167805295 Lactuca sativa
Lsat_1_v5_gn_2_88641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 167799045-167801044 Lactuca sativa
Lsat_1_v5_gn_2_88641 2.0kb downstream 2.0kb downstream 6251   true Lsat_1_v8_lg_2: 167801045-167807295 Lactuca sativa
Lsat_1_v5_gn_2_88641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 167805296-167807295 Lactuca sativa
Lsat_1_v5_gn_2_88641 5.0kb upstream 5.0kb upstream 9251   true Lsat_1_v8_lg_2: 167796045-167805295 Lactuca sativa
Lsat_1_v5_gn_2_88641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 167796045-167801044 Lactuca sativa
Lsat_1_v5_gn_2_88641 5.0kb downstream 5.0kb downstream 9251   true Lsat_1_v8_lg_2: 167801045-167810295 Lactuca sativa
Lsat_1_v5_gn_2_88641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 167805296-167810295 Lactuca sativa
Lsat_1_v5_gn_2_88641 10.0kb upstream 10.0kb upstream 14251   true Lsat_1_v8_lg_2: 167791045-167805295 Lactuca sativa
Lsat_1_v5_gn_2_88641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 167791045-167801044 Lactuca sativa
Lsat_1_v5_gn_2_88641 10.0kb downstream 10.0kb downstream 14251   true Lsat_1_v8_lg_2: 167801045-167815295 Lactuca sativa
Lsat_1_v5_gn_2_88641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 167805296-167815295 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451124 5263 Asterids View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain