Gene : Lsat_1_v5_gn_2_88881 L. sativa V8
Defline:  (1 of 1) K18467 - vacuolar protein sorting-associated protein 29 (VPS29) Genomic Order:  2538
Name:  ? Lsat_1_v5_gn_2_88881 Secondary Identifier:  ? PAC:38959852
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_88881 0.5kb upstream 0.5kb upstream 1780   true Lsat_1_v8_lg_2: 167665243-167667022 Lactuca sativa
Lsat_1_v5_gn_2_88881 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 167665243-167665742 Lactuca sativa
Lsat_1_v5_gn_2_88881 0.5kb downstream 0.5kb downstream 1780   true Lsat_1_v8_lg_2: 167665743-167667522 Lactuca sativa
Lsat_1_v5_gn_2_88881 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 167667023-167667522 Lactuca sativa
Lsat_1_v5_gn_2_88881 1.0kb upstream 1.0kb upstream 2280   true Lsat_1_v8_lg_2: 167664743-167667022 Lactuca sativa
Lsat_1_v5_gn_2_88881 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 167664743-167665742 Lactuca sativa
Lsat_1_v5_gn_2_88881 1.0kb downstream 1.0kb downstream 2280   true Lsat_1_v8_lg_2: 167665743-167668022 Lactuca sativa
Lsat_1_v5_gn_2_88881 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 167667023-167668022 Lactuca sativa
Lsat_1_v5_gn_2_88881 2.0kb upstream 2.0kb upstream 3280   true Lsat_1_v8_lg_2: 167663743-167667022 Lactuca sativa
Lsat_1_v5_gn_2_88881 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 167663743-167665742 Lactuca sativa
Lsat_1_v5_gn_2_88881 2.0kb downstream 2.0kb downstream 3280   true Lsat_1_v8_lg_2: 167665743-167669022 Lactuca sativa
Lsat_1_v5_gn_2_88881 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 167667023-167669022 Lactuca sativa
Lsat_1_v5_gn_2_88881 5.0kb upstream 5.0kb upstream 6280   true Lsat_1_v8_lg_2: 167660743-167667022 Lactuca sativa
Lsat_1_v5_gn_2_88881 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 167660743-167665742 Lactuca sativa
Lsat_1_v5_gn_2_88881 5.0kb downstream 5.0kb downstream 6280   true Lsat_1_v8_lg_2: 167665743-167672022 Lactuca sativa
Lsat_1_v5_gn_2_88881 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 167667023-167672022 Lactuca sativa
Lsat_1_v5_gn_2_88881 10.0kb upstream 10.0kb upstream 11280   true Lsat_1_v8_lg_2: 167655743-167667022 Lactuca sativa
Lsat_1_v5_gn_2_88881 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 167655743-167665742 Lactuca sativa
Lsat_1_v5_gn_2_88881 10.0kb downstream 10.0kb downstream 11280   true Lsat_1_v8_lg_2: 167665743-167677022 Lactuca sativa
Lsat_1_v5_gn_2_88881 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 167667023-167677022 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466363 5263 Asterids View MSA
123736460 5271 Pentapetalae View MSA
122787236 5272 Eudicot View MSA
122043646 5273 Angiosperm View MSA
121346806 5274 Embryophyte View MSA
123424212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain