Protein : Lsat_1_v5_gn_2_92080.3 L. sativa V8

Secondary Identifier:  PAC:38961734 Organism Name:  Lactuca sativa
Length:  420   Name:  Lsat_1_v5_gn_2_92080.3
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Ontology Annotation Displayer

Protein Family Displayer

Protein Feature Displayer

Proteins

8 Protein Domains

DB identifier Type Name
IPR012340 Domain Nucleic acid-binding, OB-fold
IPR001971 Family Ribosomal protein S11
IPR011263 Domain DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR011262 Domain DNA-directed RNA polymerase, insert domain
IPR009025 Domain DNA-directed RNA polymerase, RBP11-like dimerisation domain
IPR006196 Domain RNA-binding domain, S1, IF1 type
IPR004368 Family Translation initiation factor IF-1
IPR019981 Family Ribosomal protein S11, bacterial-type
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Lsat_1_v5_gn_2_92080.3_CDS 1263   Lsat_1_v8_lg_2: 169438895-169440923 Lactuca sativa

36 Ontology Annotations

Ontology Term Db Gene/Protein Name
GO:0003743 GO Lsat_1_v5_gn_2_92080.3
GO:0003899 GO Lsat_1_v5_gn_2_92080.3
GO:0005622 GO Lsat_1_v5_gn_2_92080.3
GO:0005840 GO Lsat_1_v5_gn_2_92080.3
GO:0006351 GO Lsat_1_v5_gn_2_92080.3
GO:0006412 GO Lsat_1_v5_gn_2_92080.3
GO:0006413 GO Lsat_1_v5_gn_2_92080.3
GO:0046983 GO Lsat_1_v5_gn_2_92080.3
2.7.7.6 ENZYME Lsat_1_v5_gn_2_92080.3
G3DSA:2.170.120.12 GENE3D Lsat_1_v5_gn_2_92080.3
G3DSA:2.40.50.140 GENE3D Lsat_1_v5_gn_2_92080.3
G3DSA:3.30.420.80 GENE3D Lsat_1_v5_gn_2_92080.3
GO:0003723 GO Lsat_1_v5_gn_2_92080.3
GO:0003735 GO Lsat_1_v5_gn_2_92080.3
IPR011263 InterPro Lsat_1_v5_gn_2_92080.3
IPR012340 InterPro Lsat_1_v5_gn_2_92080.3
IPR019981 InterPro Lsat_1_v5_gn_2_92080.3
KOG0407 KOG Lsat_1_v5_gn_2_92080.3
PTHR32108 PANTHER Lsat_1_v5_gn_2_92080.3
PTHR32108:SF0 PANTHER Lsat_1_v5_gn_2_92080.3
PF00411 PFAM Lsat_1_v5_gn_2_92080.3
IPR001971 InterPro Lsat_1_v5_gn_2_92080.3
IPR004368 InterPro Lsat_1_v5_gn_2_92080.3
IPR006196 InterPro Lsat_1_v5_gn_2_92080.3
IPR009025 InterPro Lsat_1_v5_gn_2_92080.3
IPR011262 InterPro Lsat_1_v5_gn_2_92080.3
TIGR00008 TIGRFAMs Lsat_1_v5_gn_2_92080.3
TIGR03632 TIGRFAMs Lsat_1_v5_gn_2_92080.3
PF01000 PFAM Lsat_1_v5_gn_2_92080.3
PF01176 PFAM Lsat_1_v5_gn_2_92080.3

0 Pathway Components

0 Pathways