Gene : Lsat_1_v5_gn_2_94140 L. sativa V8
Defline:  (1 of 1) PTHR11061//PTHR11061:SF29 - RNA M5U METHYLTRANSFERASE FAMILY // SUBFAMILY NOT NAMED Genomic Order:  2670
Name:  ? Lsat_1_v5_gn_2_94140 Secondary Identifier:  ? PAC:38963281
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_94140 0.5kb upstream 0.5kb upstream 4307   true Lsat_1_v8_lg_2: 171266273-171270579 Lactuca sativa
Lsat_1_v5_gn_2_94140 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 171266273-171266772 Lactuca sativa
Lsat_1_v5_gn_2_94140 0.5kb downstream 0.5kb downstream 4307   true Lsat_1_v8_lg_2: 171266773-171271079 Lactuca sativa
Lsat_1_v5_gn_2_94140 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 171270580-171271079 Lactuca sativa
Lsat_1_v5_gn_2_94140 1.0kb upstream 1.0kb upstream 4807   true Lsat_1_v8_lg_2: 171265773-171270579 Lactuca sativa
Lsat_1_v5_gn_2_94140 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 171265773-171266772 Lactuca sativa
Lsat_1_v5_gn_2_94140 1.0kb downstream 1.0kb downstream 4807   true Lsat_1_v8_lg_2: 171266773-171271579 Lactuca sativa
Lsat_1_v5_gn_2_94140 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 171270580-171271579 Lactuca sativa
Lsat_1_v5_gn_2_94140 2.0kb upstream 2.0kb upstream 5807   true Lsat_1_v8_lg_2: 171264773-171270579 Lactuca sativa
Lsat_1_v5_gn_2_94140 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 171264773-171266772 Lactuca sativa
Lsat_1_v5_gn_2_94140 2.0kb downstream 2.0kb downstream 5807   true Lsat_1_v8_lg_2: 171266773-171272579 Lactuca sativa
Lsat_1_v5_gn_2_94140 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 171270580-171272579 Lactuca sativa
Lsat_1_v5_gn_2_94140 5.0kb upstream 5.0kb upstream 8807   true Lsat_1_v8_lg_2: 171261773-171270579 Lactuca sativa
Lsat_1_v5_gn_2_94140 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 171261773-171266772 Lactuca sativa
Lsat_1_v5_gn_2_94140 5.0kb downstream 5.0kb downstream 8807   true Lsat_1_v8_lg_2: 171266773-171275579 Lactuca sativa
Lsat_1_v5_gn_2_94140 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 171270580-171275579 Lactuca sativa
Lsat_1_v5_gn_2_94140 10.0kb upstream 10.0kb upstream 13807   true Lsat_1_v8_lg_2: 171256773-171270579 Lactuca sativa
Lsat_1_v5_gn_2_94140 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 171256773-171266772 Lactuca sativa
Lsat_1_v5_gn_2_94140 10.0kb downstream 10.0kb downstream 13807   true Lsat_1_v8_lg_2: 171266773-171280579 Lactuca sativa
Lsat_1_v5_gn_2_94140 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 171270580-171280579 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469809 5263 Asterids View MSA
123738222 5271 Pentapetalae View MSA
122796833 5272 Eudicot View MSA
122044630 5273 Angiosperm View MSA
121346457 5274 Embryophyte View MSA
123428846 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain