Gene : Lsat_1_v5_gn_2_67361 L. sativa V8
Defline:  (1 of 1) PTHR32438//PTHR32438:SF5 - FAMILY NOT NAMED // 4-ALPHA-GLUCANOTRANSFERASE DPE1, CHLOROPLASTIC/AMYLOPLASTIC Genomic Order:  1706
Name:  ? Lsat_1_v5_gn_2_67361 Secondary Identifier:  ? PAC:38957874
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5941 Lactuca sativa pathologic  
Lsativa PWY-6724 Lactuca sativa pathologic  
Lsativa PWY-7238 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_67361 0.5kb upstream 0.5kb upstream 4725   true Lsat_1_v8_lg_2: 136633779-136638503 Lactuca sativa
Lsat_1_v5_gn_2_67361 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 136633779-136634278 Lactuca sativa
Lsat_1_v5_gn_2_67361 0.5kb downstream 0.5kb downstream 4725   true Lsat_1_v8_lg_2: 136634279-136639003 Lactuca sativa
Lsat_1_v5_gn_2_67361 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 136638504-136639003 Lactuca sativa
Lsat_1_v5_gn_2_67361 1.0kb upstream 1.0kb upstream 5225   true Lsat_1_v8_lg_2: 136633279-136638503 Lactuca sativa
Lsat_1_v5_gn_2_67361 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 136633279-136634278 Lactuca sativa
Lsat_1_v5_gn_2_67361 1.0kb downstream 1.0kb downstream 5225   true Lsat_1_v8_lg_2: 136634279-136639503 Lactuca sativa
Lsat_1_v5_gn_2_67361 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 136638504-136639503 Lactuca sativa
Lsat_1_v5_gn_2_67361 2.0kb upstream 2.0kb upstream 6225   true Lsat_1_v8_lg_2: 136632279-136638503 Lactuca sativa
Lsat_1_v5_gn_2_67361 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 136632279-136634278 Lactuca sativa
Lsat_1_v5_gn_2_67361 2.0kb downstream 2.0kb downstream 6225   true Lsat_1_v8_lg_2: 136634279-136640503 Lactuca sativa
Lsat_1_v5_gn_2_67361 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 136638504-136640503 Lactuca sativa
Lsat_1_v5_gn_2_67361 5.0kb upstream 5.0kb upstream 9225   true Lsat_1_v8_lg_2: 136629279-136638503 Lactuca sativa
Lsat_1_v5_gn_2_67361 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 136629279-136634278 Lactuca sativa
Lsat_1_v5_gn_2_67361 5.0kb downstream 5.0kb downstream 9225   true Lsat_1_v8_lg_2: 136634279-136643503 Lactuca sativa
Lsat_1_v5_gn_2_67361 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 136638504-136643503 Lactuca sativa
Lsat_1_v5_gn_2_67361 10.0kb upstream 10.0kb upstream 14225   true Lsat_1_v8_lg_2: 136624279-136638503 Lactuca sativa
Lsat_1_v5_gn_2_67361 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 136624279-136634278 Lactuca sativa
Lsat_1_v5_gn_2_67361 10.0kb downstream 10.0kb downstream 14225   true Lsat_1_v8_lg_2: 136634279-136648503 Lactuca sativa
Lsat_1_v5_gn_2_67361 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 136638504-136648503 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474461 5263 Asterids View MSA
123741915 5271 Pentapetalae View MSA
122794283 5272 Eudicot View MSA
122048475 5273 Angiosperm View MSA
121348239 5274 Embryophyte View MSA
123427426 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain