Gene : Lsat_1_v5_gn_2_68621 L. sativa V8
Defline:  (1 of 2) PTHR20852//PTHR20852:SF59 - GLUTAMINE SYNTHETASE // SUBFAMILY NOT NAMED Genomic Order:  1812
Name:  ? Lsat_1_v5_gn_2_68621 Secondary Identifier:  ? PAC:38959410
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLNSYN-PWY Lactuca sativa pathologic  
Lsativa PWY-3282 Lactuca sativa pathologic  
Lsativa PWY-381 Lactuca sativa pathologic  
Lsativa PWY-6549 Lactuca sativa pathologic  
Lsativa PWY-6963 Lactuca sativa pathologic  
Lsativa PWY-6964 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_68621 0.5kb upstream 0.5kb upstream 3591   true Lsat_1_v8_lg_2: 140501335-140504925 Lactuca sativa
Lsat_1_v5_gn_2_68621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 140504426-140504925 Lactuca sativa
Lsat_1_v5_gn_2_68621 0.5kb downstream 0.5kb downstream 3591   true Lsat_1_v8_lg_2: 140500835-140504425 Lactuca sativa
Lsat_1_v5_gn_2_68621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 140500835-140501334 Lactuca sativa
Lsat_1_v5_gn_2_68621 1.0kb upstream 1.0kb upstream 4091   true Lsat_1_v8_lg_2: 140501335-140505425 Lactuca sativa
Lsat_1_v5_gn_2_68621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 140504426-140505425 Lactuca sativa
Lsat_1_v5_gn_2_68621 1.0kb downstream 1.0kb downstream 4091   true Lsat_1_v8_lg_2: 140500335-140504425 Lactuca sativa
Lsat_1_v5_gn_2_68621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 140500335-140501334 Lactuca sativa
Lsat_1_v5_gn_2_68621 2.0kb upstream 2.0kb upstream 5091   true Lsat_1_v8_lg_2: 140501335-140506425 Lactuca sativa
Lsat_1_v5_gn_2_68621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 140504426-140506425 Lactuca sativa
Lsat_1_v5_gn_2_68621 2.0kb downstream 2.0kb downstream 5091   true Lsat_1_v8_lg_2: 140499335-140504425 Lactuca sativa
Lsat_1_v5_gn_2_68621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 140499335-140501334 Lactuca sativa
Lsat_1_v5_gn_2_68621 5.0kb upstream 5.0kb upstream 8091   true Lsat_1_v8_lg_2: 140501335-140509425 Lactuca sativa
Lsat_1_v5_gn_2_68621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 140504426-140509425 Lactuca sativa
Lsat_1_v5_gn_2_68621 5.0kb downstream 5.0kb downstream 8091   true Lsat_1_v8_lg_2: 140496335-140504425 Lactuca sativa
Lsat_1_v5_gn_2_68621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 140496335-140501334 Lactuca sativa
Lsat_1_v5_gn_2_68621 10.0kb upstream 10.0kb upstream 13091   true Lsat_1_v8_lg_2: 140501335-140514425 Lactuca sativa
Lsat_1_v5_gn_2_68621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 140504426-140514425 Lactuca sativa
Lsat_1_v5_gn_2_68621 10.0kb downstream 10.0kb downstream 13091   true Lsat_1_v8_lg_2: 140491335-140504425 Lactuca sativa
Lsat_1_v5_gn_2_68621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 140491335-140501334 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478072 5263 Asterids View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain