Gene : Lsat_1_v5_gn_2_70541 L. sativa V8
Defline:  (1 of 7) PTHR23321//PTHR23321:SF33 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR // SUBFAMILY NOT NAMED Genomic Order:  1863
Name:  ? Lsat_1_v5_gn_2_70541 Secondary Identifier:  ? PAC:38957449
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CALVIN-PWY Lactuca sativa pathologic  
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_70541 0.5kb upstream 0.5kb upstream 1853   true Lsat_1_v8_lg_2: 142788858-142790710 Lactuca sativa
Lsat_1_v5_gn_2_70541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 142790211-142790710 Lactuca sativa
Lsat_1_v5_gn_2_70541 0.5kb downstream 0.5kb downstream 1853   true Lsat_1_v8_lg_2: 142788358-142790210 Lactuca sativa
Lsat_1_v5_gn_2_70541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 142788358-142788857 Lactuca sativa
Lsat_1_v5_gn_2_70541 1.0kb upstream 1.0kb upstream 2353   true Lsat_1_v8_lg_2: 142788858-142791210 Lactuca sativa
Lsat_1_v5_gn_2_70541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 142790211-142791210 Lactuca sativa
Lsat_1_v5_gn_2_70541 1.0kb downstream 1.0kb downstream 2353   true Lsat_1_v8_lg_2: 142787858-142790210 Lactuca sativa
Lsat_1_v5_gn_2_70541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 142787858-142788857 Lactuca sativa
Lsat_1_v5_gn_2_70541 2.0kb upstream 2.0kb upstream 3353   true Lsat_1_v8_lg_2: 142788858-142792210 Lactuca sativa
Lsat_1_v5_gn_2_70541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 142790211-142792210 Lactuca sativa
Lsat_1_v5_gn_2_70541 2.0kb downstream 2.0kb downstream 3353   true Lsat_1_v8_lg_2: 142786858-142790210 Lactuca sativa
Lsat_1_v5_gn_2_70541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 142786858-142788857 Lactuca sativa
Lsat_1_v5_gn_2_70541 5.0kb upstream 5.0kb upstream 6353   true Lsat_1_v8_lg_2: 142788858-142795210 Lactuca sativa
Lsat_1_v5_gn_2_70541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 142790211-142795210 Lactuca sativa
Lsat_1_v5_gn_2_70541 5.0kb downstream 5.0kb downstream 6353   true Lsat_1_v8_lg_2: 142783858-142790210 Lactuca sativa
Lsat_1_v5_gn_2_70541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 142783858-142788857 Lactuca sativa
Lsat_1_v5_gn_2_70541 10.0kb upstream 10.0kb upstream 11353   true Lsat_1_v8_lg_2: 142788858-142800210 Lactuca sativa
Lsat_1_v5_gn_2_70541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 142790211-142800210 Lactuca sativa
Lsat_1_v5_gn_2_70541 10.0kb downstream 10.0kb downstream 11353   true Lsat_1_v8_lg_2: 142778858-142790210 Lactuca sativa
Lsat_1_v5_gn_2_70541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 142778858-142788857 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121453566 5263 Asterids View MSA
123751247 5271 Pentapetalae View MSA
122773961 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain