Gene : Lsat_1_v5_gn_2_70300 L. sativa V8
Defline:  (1 of 1) PTHR13060 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 Genomic Order:  1856
Name:  ? Lsat_1_v5_gn_2_70300 Secondary Identifier:  ? PAC:38958439
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_70300 0.5kb upstream 0.5kb upstream 3283   true Lsat_1_v8_lg_2: 142650787-142654069 Lactuca sativa
Lsat_1_v5_gn_2_70300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 142650787-142651286 Lactuca sativa
Lsat_1_v5_gn_2_70300 0.5kb downstream 0.5kb downstream 3283   true Lsat_1_v8_lg_2: 142651287-142654569 Lactuca sativa
Lsat_1_v5_gn_2_70300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 142654070-142654569 Lactuca sativa
Lsat_1_v5_gn_2_70300 1.0kb upstream 1.0kb upstream 3783   true Lsat_1_v8_lg_2: 142650287-142654069 Lactuca sativa
Lsat_1_v5_gn_2_70300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 142650287-142651286 Lactuca sativa
Lsat_1_v5_gn_2_70300 1.0kb downstream 1.0kb downstream 3783   true Lsat_1_v8_lg_2: 142651287-142655069 Lactuca sativa
Lsat_1_v5_gn_2_70300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 142654070-142655069 Lactuca sativa
Lsat_1_v5_gn_2_70300 2.0kb upstream 2.0kb upstream 4783   true Lsat_1_v8_lg_2: 142649287-142654069 Lactuca sativa
Lsat_1_v5_gn_2_70300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 142649287-142651286 Lactuca sativa
Lsat_1_v5_gn_2_70300 2.0kb downstream 2.0kb downstream 4783   true Lsat_1_v8_lg_2: 142651287-142656069 Lactuca sativa
Lsat_1_v5_gn_2_70300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 142654070-142656069 Lactuca sativa
Lsat_1_v5_gn_2_70300 5.0kb upstream 5.0kb upstream 7783   true Lsat_1_v8_lg_2: 142646287-142654069 Lactuca sativa
Lsat_1_v5_gn_2_70300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 142646287-142651286 Lactuca sativa
Lsat_1_v5_gn_2_70300 5.0kb downstream 5.0kb downstream 7783   true Lsat_1_v8_lg_2: 142651287-142659069 Lactuca sativa
Lsat_1_v5_gn_2_70300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 142654070-142659069 Lactuca sativa
Lsat_1_v5_gn_2_70300 10.0kb upstream 10.0kb upstream 12783   true Lsat_1_v8_lg_2: 142641287-142654069 Lactuca sativa
Lsat_1_v5_gn_2_70300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 142641287-142651286 Lactuca sativa
Lsat_1_v5_gn_2_70300 10.0kb downstream 10.0kb downstream 12783   true Lsat_1_v8_lg_2: 142651287-142664069 Lactuca sativa
Lsat_1_v5_gn_2_70300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 142654070-142664069 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474087 5263 Asterids View MSA
123740362 5271 Pentapetalae View MSA
122792261 5272 Eudicot View MSA
122046439 5273 Angiosperm View MSA
121348661 5274 Embryophyte View MSA
123424797 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain