Gene : Lsat_1_v5_gn_2_72540 L. sativa V8
Defline:  (1 of 2) PTHR31384//PTHR31384:SF3 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 6 Genomic Order:  1948
Name:  ? Lsat_1_v5_gn_2_72540 Secondary Identifier:  ? PAC:38959345
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_72540 0.5kb upstream 0.5kb upstream 5014   true Lsat_1_v8_lg_2: 146431796-146436809 Lactuca sativa
Lsat_1_v5_gn_2_72540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 146431796-146432295 Lactuca sativa
Lsat_1_v5_gn_2_72540 0.5kb downstream 0.5kb downstream 5014   true Lsat_1_v8_lg_2: 146432296-146437309 Lactuca sativa
Lsat_1_v5_gn_2_72540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 146436810-146437309 Lactuca sativa
Lsat_1_v5_gn_2_72540 1.0kb upstream 1.0kb upstream 5514   true Lsat_1_v8_lg_2: 146431296-146436809 Lactuca sativa
Lsat_1_v5_gn_2_72540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 146431296-146432295 Lactuca sativa
Lsat_1_v5_gn_2_72540 1.0kb downstream 1.0kb downstream 5514   true Lsat_1_v8_lg_2: 146432296-146437809 Lactuca sativa
Lsat_1_v5_gn_2_72540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 146436810-146437809 Lactuca sativa
Lsat_1_v5_gn_2_72540 2.0kb upstream 2.0kb upstream 6514   true Lsat_1_v8_lg_2: 146430296-146436809 Lactuca sativa
Lsat_1_v5_gn_2_72540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 146430296-146432295 Lactuca sativa
Lsat_1_v5_gn_2_72540 2.0kb downstream 2.0kb downstream 6514   true Lsat_1_v8_lg_2: 146432296-146438809 Lactuca sativa
Lsat_1_v5_gn_2_72540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 146436810-146438809 Lactuca sativa
Lsat_1_v5_gn_2_72540 5.0kb upstream 5.0kb upstream 9514   true Lsat_1_v8_lg_2: 146427296-146436809 Lactuca sativa
Lsat_1_v5_gn_2_72540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 146427296-146432295 Lactuca sativa
Lsat_1_v5_gn_2_72540 5.0kb downstream 5.0kb downstream 9514   true Lsat_1_v8_lg_2: 146432296-146441809 Lactuca sativa
Lsat_1_v5_gn_2_72540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 146436810-146441809 Lactuca sativa
Lsat_1_v5_gn_2_72540 10.0kb upstream 10.0kb upstream 14514   true Lsat_1_v8_lg_2: 146422296-146436809 Lactuca sativa
Lsat_1_v5_gn_2_72540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 146422296-146432295 Lactuca sativa
Lsat_1_v5_gn_2_72540 10.0kb downstream 10.0kb downstream 14514   true Lsat_1_v8_lg_2: 146432296-146446809 Lactuca sativa
Lsat_1_v5_gn_2_72540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 146436810-146446809 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481245 5263 Asterids View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain