Gene : Lsat_1_v5_gn_2_73081 L. sativa V8

Defline:  (1 of 6) PTHR31651//PTHR31651:SF5 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED Genomic Order:  1962
Name:  ? Lsat_1_v5_gn_2_73081 Secondary Identifier:  ? PAC:38962449

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_73081 0.5kb upstream 0.5kb upstream 3659   true Lsat_1_v8_lg_2: 146923547-146927205 Lactuca sativa
Lsat_1_v5_gn_2_73081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 146926706-146927205 Lactuca sativa
Lsat_1_v5_gn_2_73081 0.5kb downstream 0.5kb downstream 3659   true Lsat_1_v8_lg_2: 146923047-146926705 Lactuca sativa
Lsat_1_v5_gn_2_73081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 146923047-146923546 Lactuca sativa
Lsat_1_v5_gn_2_73081 1.0kb upstream 1.0kb upstream 4159   true Lsat_1_v8_lg_2: 146923547-146927705 Lactuca sativa
Lsat_1_v5_gn_2_73081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 146926706-146927705 Lactuca sativa
Lsat_1_v5_gn_2_73081 1.0kb downstream 1.0kb downstream 4159   true Lsat_1_v8_lg_2: 146922547-146926705 Lactuca sativa
Lsat_1_v5_gn_2_73081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 146922547-146923546 Lactuca sativa
Lsat_1_v5_gn_2_73081 2.0kb upstream 2.0kb upstream 5159   true Lsat_1_v8_lg_2: 146923547-146928705 Lactuca sativa
Lsat_1_v5_gn_2_73081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 146926706-146928705 Lactuca sativa
Lsat_1_v5_gn_2_73081 2.0kb downstream 2.0kb downstream 5159   true Lsat_1_v8_lg_2: 146921547-146926705 Lactuca sativa
Lsat_1_v5_gn_2_73081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 146921547-146923546 Lactuca sativa
Lsat_1_v5_gn_2_73081 5.0kb upstream 5.0kb upstream 8159   true Lsat_1_v8_lg_2: 146923547-146931705 Lactuca sativa
Lsat_1_v5_gn_2_73081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 146926706-146931705 Lactuca sativa
Lsat_1_v5_gn_2_73081 5.0kb downstream 5.0kb downstream 8159   true Lsat_1_v8_lg_2: 146918547-146926705 Lactuca sativa
Lsat_1_v5_gn_2_73081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 146918547-146923546 Lactuca sativa
Lsat_1_v5_gn_2_73081 10.0kb upstream 10.0kb upstream 13159   true Lsat_1_v8_lg_2: 146923547-146936705 Lactuca sativa
Lsat_1_v5_gn_2_73081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 146926706-146936705 Lactuca sativa
Lsat_1_v5_gn_2_73081 10.0kb downstream 10.0kb downstream 13159   true Lsat_1_v8_lg_2: 146913547-146926705 Lactuca sativa
Lsat_1_v5_gn_2_73081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 146913547-146923546 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026446 5273 Angiosperm View MSA
121474186 5263 Asterids View MSA
123751038 5271 Pentapetalae View MSA
122794652 5272 Eudicot View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain