Gene : Lsat_1_v5_gn_2_73001 L. sativa V8
Defline:  (1 of 6) PTHR31651//PTHR31651:SF5 - FAMILY NOT NAMED // AUXIN EFFLUX CARRIER FAMILY PROTEIN-RELATED Genomic Order:  1959
Name:  ? Lsat_1_v5_gn_2_73001 Secondary Identifier:  ? PAC:38961773
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_73001 0.5kb upstream 0.5kb upstream 3873   true Lsat_1_v8_lg_2: 146778322-146782194 Lactuca sativa
Lsat_1_v5_gn_2_73001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 146781695-146782194 Lactuca sativa
Lsat_1_v5_gn_2_73001 0.5kb downstream 0.5kb downstream 3873   true Lsat_1_v8_lg_2: 146777822-146781694 Lactuca sativa
Lsat_1_v5_gn_2_73001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 146777822-146778321 Lactuca sativa
Lsat_1_v5_gn_2_73001 1.0kb upstream 1.0kb upstream 4373   true Lsat_1_v8_lg_2: 146778322-146782694 Lactuca sativa
Lsat_1_v5_gn_2_73001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 146781695-146782694 Lactuca sativa
Lsat_1_v5_gn_2_73001 1.0kb downstream 1.0kb downstream 4373   true Lsat_1_v8_lg_2: 146777322-146781694 Lactuca sativa
Lsat_1_v5_gn_2_73001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 146777322-146778321 Lactuca sativa
Lsat_1_v5_gn_2_73001 2.0kb upstream 2.0kb upstream 5373   true Lsat_1_v8_lg_2: 146778322-146783694 Lactuca sativa
Lsat_1_v5_gn_2_73001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 146781695-146783694 Lactuca sativa
Lsat_1_v5_gn_2_73001 2.0kb downstream 2.0kb downstream 5373   true Lsat_1_v8_lg_2: 146776322-146781694 Lactuca sativa
Lsat_1_v5_gn_2_73001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 146776322-146778321 Lactuca sativa
Lsat_1_v5_gn_2_73001 5.0kb upstream 5.0kb upstream 8373   true Lsat_1_v8_lg_2: 146778322-146786694 Lactuca sativa
Lsat_1_v5_gn_2_73001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 146781695-146786694 Lactuca sativa
Lsat_1_v5_gn_2_73001 5.0kb downstream 5.0kb downstream 8373   true Lsat_1_v8_lg_2: 146773322-146781694 Lactuca sativa
Lsat_1_v5_gn_2_73001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 146773322-146778321 Lactuca sativa
Lsat_1_v5_gn_2_73001 10.0kb upstream 10.0kb upstream 13373   true Lsat_1_v8_lg_2: 146778322-146791694 Lactuca sativa
Lsat_1_v5_gn_2_73001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 146781695-146791694 Lactuca sativa
Lsat_1_v5_gn_2_73001 10.0kb downstream 10.0kb downstream 13373   true Lsat_1_v8_lg_2: 146768322-146781694 Lactuca sativa
Lsat_1_v5_gn_2_73001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 146768322-146778321 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026446 5273 Angiosperm View MSA
121474186 5263 Asterids View MSA
123751038 5271 Pentapetalae View MSA
122794652 5272 Eudicot View MSA
123429004 5275 Viridiplantae View MSA
121349316 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain