Gene : Lsat_1_v5_gn_2_7520 L. sativa V8
Defline:  (1 of 79) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  201
Name:  ? Lsat_1_v5_gn_2_7520 Secondary Identifier:  ? PAC:38963224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_7520 0.5kb upstream 0.5kb upstream 3027   true Lsat_1_v8_lg_2: 14434834-14437860 Lactuca sativa
Lsat_1_v5_gn_2_7520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 14437361-14437860 Lactuca sativa
Lsat_1_v5_gn_2_7520 0.5kb downstream 0.5kb downstream 3027   true Lsat_1_v8_lg_2: 14434334-14437360 Lactuca sativa
Lsat_1_v5_gn_2_7520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 14434334-14434833 Lactuca sativa
Lsat_1_v5_gn_2_7520 1.0kb upstream 1.0kb upstream 3527   true Lsat_1_v8_lg_2: 14434834-14438360 Lactuca sativa
Lsat_1_v5_gn_2_7520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 14437361-14438360 Lactuca sativa
Lsat_1_v5_gn_2_7520 1.0kb downstream 1.0kb downstream 3527   true Lsat_1_v8_lg_2: 14433834-14437360 Lactuca sativa
Lsat_1_v5_gn_2_7520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 14433834-14434833 Lactuca sativa
Lsat_1_v5_gn_2_7520 2.0kb upstream 2.0kb upstream 4527   true Lsat_1_v8_lg_2: 14434834-14439360 Lactuca sativa
Lsat_1_v5_gn_2_7520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 14437361-14439360 Lactuca sativa
Lsat_1_v5_gn_2_7520 2.0kb downstream 2.0kb downstream 4527   true Lsat_1_v8_lg_2: 14432834-14437360 Lactuca sativa
Lsat_1_v5_gn_2_7520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 14432834-14434833 Lactuca sativa
Lsat_1_v5_gn_2_7520 5.0kb upstream 5.0kb upstream 7527   true Lsat_1_v8_lg_2: 14434834-14442360 Lactuca sativa
Lsat_1_v5_gn_2_7520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 14437361-14442360 Lactuca sativa
Lsat_1_v5_gn_2_7520 5.0kb downstream 5.0kb downstream 7527   true Lsat_1_v8_lg_2: 14429834-14437360 Lactuca sativa
Lsat_1_v5_gn_2_7520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 14429834-14434833 Lactuca sativa
Lsat_1_v5_gn_2_7520 10.0kb upstream 10.0kb upstream 12527   true Lsat_1_v8_lg_2: 14434834-14447360 Lactuca sativa
Lsat_1_v5_gn_2_7520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 14437361-14447360 Lactuca sativa
Lsat_1_v5_gn_2_7520 10.0kb downstream 10.0kb downstream 12527   true Lsat_1_v8_lg_2: 14424834-14437360 Lactuca sativa
Lsat_1_v5_gn_2_7520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 14424834-14434833 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474295 5263 Asterids View MSA
123740477 5271 Pentapetalae View MSA
122791642 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain