Gene : Lsat_1_v5_gn_2_76281 L. sativa V8
Defline:  (1 of 2) K06287 - septum formation protein (maf) Genomic Order:  2112
Name:  ? Lsat_1_v5_gn_2_76281 Secondary Identifier:  ? PAC:38961638
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_76281 0.5kb upstream 0.5kb upstream 3348   true Lsat_1_v8_lg_2: 152423500-152426847 Lactuca sativa
Lsat_1_v5_gn_2_76281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 152423500-152423999 Lactuca sativa
Lsat_1_v5_gn_2_76281 0.5kb downstream 0.5kb downstream 3348   true Lsat_1_v8_lg_2: 152424000-152427347 Lactuca sativa
Lsat_1_v5_gn_2_76281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 152426848-152427347 Lactuca sativa
Lsat_1_v5_gn_2_76281 1.0kb upstream 1.0kb upstream 3848   true Lsat_1_v8_lg_2: 152423000-152426847 Lactuca sativa
Lsat_1_v5_gn_2_76281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 152423000-152423999 Lactuca sativa
Lsat_1_v5_gn_2_76281 1.0kb downstream 1.0kb downstream 3848   true Lsat_1_v8_lg_2: 152424000-152427847 Lactuca sativa
Lsat_1_v5_gn_2_76281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 152426848-152427847 Lactuca sativa
Lsat_1_v5_gn_2_76281 2.0kb upstream 2.0kb upstream 4848   true Lsat_1_v8_lg_2: 152422000-152426847 Lactuca sativa
Lsat_1_v5_gn_2_76281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 152422000-152423999 Lactuca sativa
Lsat_1_v5_gn_2_76281 2.0kb downstream 2.0kb downstream 4848   true Lsat_1_v8_lg_2: 152424000-152428847 Lactuca sativa
Lsat_1_v5_gn_2_76281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 152426848-152428847 Lactuca sativa
Lsat_1_v5_gn_2_76281 5.0kb upstream 5.0kb upstream 7848   true Lsat_1_v8_lg_2: 152419000-152426847 Lactuca sativa
Lsat_1_v5_gn_2_76281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 152419000-152423999 Lactuca sativa
Lsat_1_v5_gn_2_76281 5.0kb downstream 5.0kb downstream 7848   true Lsat_1_v8_lg_2: 152424000-152431847 Lactuca sativa
Lsat_1_v5_gn_2_76281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 152426848-152431847 Lactuca sativa
Lsat_1_v5_gn_2_76281 10.0kb upstream 10.0kb upstream 12848   true Lsat_1_v8_lg_2: 152414000-152426847 Lactuca sativa
Lsat_1_v5_gn_2_76281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 152414000-152423999 Lactuca sativa
Lsat_1_v5_gn_2_76281 10.0kb downstream 10.0kb downstream 12848   true Lsat_1_v8_lg_2: 152424000-152436847 Lactuca sativa
Lsat_1_v5_gn_2_76281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 152426848-152436847 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472958 5263 Asterids View MSA
123742079 5271 Pentapetalae View MSA
122790099 5272 Eudicot View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain