Gene : Lsat_1_v5_gn_2_78501 L. sativa V8
Defline:  (1 of 3) PTHR11010//PTHR11010:SF42 - PROTEASE S28 PRO-X CARBOXYPEPTIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2076
Name:  ? Lsat_1_v5_gn_2_78501 Secondary Identifier:  ? PAC:38957500
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_78501 0.5kb upstream 0.5kb upstream 11098   true Lsat_1_v8_lg_2: 151198085-151209182 Lactuca sativa
Lsat_1_v5_gn_2_78501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 151198085-151198584 Lactuca sativa
Lsat_1_v5_gn_2_78501 0.5kb downstream 0.5kb downstream 11098   true Lsat_1_v8_lg_2: 151198585-151209682 Lactuca sativa
Lsat_1_v5_gn_2_78501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 151209183-151209682 Lactuca sativa
Lsat_1_v5_gn_2_78501 1.0kb upstream 1.0kb upstream 11598   true Lsat_1_v8_lg_2: 151197585-151209182 Lactuca sativa
Lsat_1_v5_gn_2_78501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 151197585-151198584 Lactuca sativa
Lsat_1_v5_gn_2_78501 1.0kb downstream 1.0kb downstream 11598   true Lsat_1_v8_lg_2: 151198585-151210182 Lactuca sativa
Lsat_1_v5_gn_2_78501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 151209183-151210182 Lactuca sativa
Lsat_1_v5_gn_2_78501 2.0kb upstream 2.0kb upstream 12598   true Lsat_1_v8_lg_2: 151196585-151209182 Lactuca sativa
Lsat_1_v5_gn_2_78501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 151196585-151198584 Lactuca sativa
Lsat_1_v5_gn_2_78501 2.0kb downstream 2.0kb downstream 12598   true Lsat_1_v8_lg_2: 151198585-151211182 Lactuca sativa
Lsat_1_v5_gn_2_78501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 151209183-151211182 Lactuca sativa
Lsat_1_v5_gn_2_78501 5.0kb upstream 5.0kb upstream 15598   true Lsat_1_v8_lg_2: 151193585-151209182 Lactuca sativa
Lsat_1_v5_gn_2_78501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 151193585-151198584 Lactuca sativa
Lsat_1_v5_gn_2_78501 5.0kb downstream 5.0kb downstream 15598   true Lsat_1_v8_lg_2: 151198585-151214182 Lactuca sativa
Lsat_1_v5_gn_2_78501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 151209183-151214182 Lactuca sativa
Lsat_1_v5_gn_2_78501 10.0kb upstream 10.0kb upstream 20598   true Lsat_1_v8_lg_2: 151188585-151209182 Lactuca sativa
Lsat_1_v5_gn_2_78501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 151188585-151198584 Lactuca sativa
Lsat_1_v5_gn_2_78501 10.0kb downstream 10.0kb downstream 20598   true Lsat_1_v8_lg_2: 151198585-151219182 Lactuca sativa
Lsat_1_v5_gn_2_78501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 151209183-151219182 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781479 5273 Angiosperm View MSA
121450925 5263 Asterids View MSA
123749732 5271 Pentapetalae View MSA
122773289 5272 Eudicot View MSA
121053054 5274 Embryophyte View MSA
123093084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain