Gene : Lsat_1_v5_gn_2_78460 L. sativa V8
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  2078
Name:  ? Lsat_1_v5_gn_2_78460 Secondary Identifier:  ? PAC:38960359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_78460 0.5kb upstream 0.5kb upstream 3547   true Lsat_1_v8_lg_2: 151213691-151217237 Lactuca sativa
Lsat_1_v5_gn_2_78460 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 151216738-151217237 Lactuca sativa
Lsat_1_v5_gn_2_78460 0.5kb downstream 0.5kb downstream 3547   true Lsat_1_v8_lg_2: 151213191-151216737 Lactuca sativa
Lsat_1_v5_gn_2_78460 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 151213191-151213690 Lactuca sativa
Lsat_1_v5_gn_2_78460 1.0kb upstream 1.0kb upstream 4047   true Lsat_1_v8_lg_2: 151213691-151217737 Lactuca sativa
Lsat_1_v5_gn_2_78460 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 151216738-151217737 Lactuca sativa
Lsat_1_v5_gn_2_78460 1.0kb downstream 1.0kb downstream 4047   true Lsat_1_v8_lg_2: 151212691-151216737 Lactuca sativa
Lsat_1_v5_gn_2_78460 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 151212691-151213690 Lactuca sativa
Lsat_1_v5_gn_2_78460 2.0kb upstream 2.0kb upstream 5047   true Lsat_1_v8_lg_2: 151213691-151218737 Lactuca sativa
Lsat_1_v5_gn_2_78460 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 151216738-151218737 Lactuca sativa
Lsat_1_v5_gn_2_78460 2.0kb downstream 2.0kb downstream 5047   true Lsat_1_v8_lg_2: 151211691-151216737 Lactuca sativa
Lsat_1_v5_gn_2_78460 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 151211691-151213690 Lactuca sativa
Lsat_1_v5_gn_2_78460 5.0kb upstream 5.0kb upstream 8047   true Lsat_1_v8_lg_2: 151213691-151221737 Lactuca sativa
Lsat_1_v5_gn_2_78460 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 151216738-151221737 Lactuca sativa
Lsat_1_v5_gn_2_78460 5.0kb downstream 5.0kb downstream 8047   true Lsat_1_v8_lg_2: 151208691-151216737 Lactuca sativa
Lsat_1_v5_gn_2_78460 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 151208691-151213690 Lactuca sativa
Lsat_1_v5_gn_2_78460 10.0kb upstream 10.0kb upstream 13047   true Lsat_1_v8_lg_2: 151213691-151226737 Lactuca sativa
Lsat_1_v5_gn_2_78460 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 151216738-151226737 Lactuca sativa
Lsat_1_v5_gn_2_78460 10.0kb downstream 10.0kb downstream 13047   true Lsat_1_v8_lg_2: 151203691-151216737 Lactuca sativa
Lsat_1_v5_gn_2_78460 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 151203691-151213690 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470039 5263 Asterids View MSA
123752035 5271 Pentapetalae View MSA
122790420 5272 Eudicot View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain